Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
KDELR3O43731 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
KDELR3O43731 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
KDELR3O43731 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.08■□□□□ 0.33
KDELR3O43731 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
KDELR3O43731 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
KDELR3O43731 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
KDELR3O43731 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
KDELR3O43731 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
KDELR3O43731 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC17.08■□□□□ 0.32
KDELR3O43731 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC17.08■□□□□ 0.32
KDELR3O43731 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
KDELR3O43731 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
KDELR3O43731 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
KDELR3O43731 PMS2P4-201ENST00000412466 1052 ntBASIC17.08■□□□□ 0.32
KDELR3O43731 UPF3AP3-201ENST00000420996 769 ntBASIC17.08■□□□□ 0.32
KDELR3O43731 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC17.08■□□□□ 0.32
KDELR3O43731 WDR53-204ENST00000433160 887 ntTSL 5 BASIC17.08■□□□□ 0.32
KDELR3O43731 FIS1-203ENST00000442303 631 ntTSL 3 BASIC17.08■□□□□ 0.32
KDELR3O43731 AC112482.1-201ENST00000492080 688 ntBASIC17.08■□□□□ 0.32
KDELR3O43731 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
KDELR3O43731 MIR3687-2-201ENST00000577708 61 ntBASIC17.08■□□□□ 0.32
KDELR3O43731 CD7-202ENST00000578509 925 ntTSL 3 BASIC17.08■□□□□ 0.32
KDELR3O43731 MIR3909-201ENST00000579518 119 ntBASIC17.08■□□□□ 0.32
KDELR3O43731 AL009183.1-201ENST00000603760 355 ntBASIC17.08■□□□□ 0.32
KDELR3O43731 AL031055.1-201ENST00000606362 631 ntBASIC17.08■□□□□ 0.32
KDELR3O43731 MIR3687-1-201ENST00000614492 61 ntBASIC17.08■□□□□ 0.32
KDELR3O43731 AC023511.2-201ENST00000618803 211 ntBASIC17.08■□□□□ 0.32
KDELR3O43731 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
KDELR3O43731 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
KDELR3O43731 AL671710.1-201ENST00000610245 2349 ntBASIC17.08■□□□□ 0.32
KDELR3O43731 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.08■□□□□ 0.32
KDELR3O43731 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
KDELR3O43731 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
KDELR3O43731 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.32
KDELR3O43731 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
KDELR3O43731 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
KDELR3O43731 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
KDELR3O43731 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
KDELR3O43731 AC020916.1-201ENST00000587762 1774 ntBASIC17.07■□□□□ 0.32
KDELR3O43731 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC17.07■□□□□ 0.32
KDELR3O43731 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC17.07■□□□□ 0.32
KDELR3O43731 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
KDELR3O43731 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
KDELR3O43731 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
KDELR3O43731 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
KDELR3O43731 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.07■□□□□ 0.32
KDELR3O43731 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
KDELR3O43731 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
KDELR3O43731 NEK7-201ENST00000367383 586 ntTSL 2 BASIC17.07■□□□□ 0.32
KDELR3O43731 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
KDELR3O43731 AC002056.1-201ENST00000395613 760 ntBASIC17.07■□□□□ 0.32
KDELR3O43731 RPSAP43-201ENST00000402237 625 ntBASIC17.07■□□□□ 0.32
KDELR3O43731 AC092474.2-201ENST00000424288 719 ntBASIC17.07■□□□□ 0.32
KDELR3O43731 GPX1P2-201ENST00000429271 606 ntBASIC17.07■□□□□ 0.32
KDELR3O43731 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC17.07■□□□□ 0.32
KDELR3O43731 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
KDELR3O43731 AC112191.1-201ENST00000523689 701 ntBASIC17.07■□□□□ 0.32
KDELR3O43731 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC17.07■□□□□ 0.32
KDELR3O43731 AC010327.4-202ENST00000591484 748 ntBASIC17.07■□□□□ 0.32
KDELR3O43731 AC091812.2-201ENST00000619081 385 ntBASIC17.07■□□□□ 0.32
KDELR3O43731 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC17.07■□□□□ 0.32
KDELR3O43731 AC078925.2-201ENST00000624013 1973 ntBASIC17.07■□□□□ 0.32
KDELR3O43731 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
KDELR3O43731 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
KDELR3O43731 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.07■□□□□ 0.32
KDELR3O43731 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
KDELR3O43731 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
KDELR3O43731 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.07■□□□□ 0.32
KDELR3O43731 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC17.07■□□□□ 0.32
KDELR3O43731 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
KDELR3O43731 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
KDELR3O43731 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
KDELR3O43731 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
KDELR3O43731 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
KDELR3O43731 AL603756.1-201ENST00000606511 2163 ntBASIC17.06■□□□□ 0.32
KDELR3O43731 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
KDELR3O43731 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
KDELR3O43731 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
KDELR3O43731 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
KDELR3O43731 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC17.06■□□□□ 0.32
KDELR3O43731 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.06■□□□□ 0.32
KDELR3O43731 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
KDELR3O43731 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
KDELR3O43731 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
KDELR3O43731 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
KDELR3O43731 RNF216P1-203ENST00000404404 2427 ntBASIC17.06■□□□□ 0.32
KDELR3O43731 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.06■□□□□ 0.32
KDELR3O43731 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
KDELR3O43731 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
KDELR3O43731 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.06■□□□□ 0.32
KDELR3O43731 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
KDELR3O43731 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC17.06■□□□□ 0.32
KDELR3O43731 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
KDELR3O43731 KRT18P13-201ENST00000400056 1290 ntBASIC17.06■□□□□ 0.32
KDELR3O43731 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC17.06■□□□□ 0.32
KDELR3O43731 FAM58CP-201ENST00000435741 640 ntBASIC17.06■□□□□ 0.32
KDELR3O43731 MKNK2P1-201ENST00000437526 628 ntBASIC17.06■□□□□ 0.32
KDELR3O43731 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
KDELR3O43731 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms