Protein–RNA interactions for Protein: O15041

SEMA3E, Semaphorin-3E, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3EO15041 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SEMA3EO15041 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SEMA3EO15041 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC20.23■□□□□ 0.83
SEMA3EO15041 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SEMA3EO15041 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SEMA3EO15041 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SEMA3EO15041 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SEMA3EO15041 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
SEMA3EO15041 LTB4R2-202ENST00000528054 3092 ntBASIC20.22■□□□□ 0.83
SEMA3EO15041 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SEMA3EO15041 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
SEMA3EO15041 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC20.22■□□□□ 0.83
SEMA3EO15041 SNX33P1-201ENST00000592116 1762 ntBASIC20.22■□□□□ 0.83
SEMA3EO15041 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC20.22■□□□□ 0.83
SEMA3EO15041 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC20.22■□□□□ 0.83
SEMA3EO15041 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC20.22■□□□□ 0.83
SEMA3EO15041 AC105233.2-201ENST00000523697 349 ntBASIC20.22■□□□□ 0.83
SEMA3EO15041 AF228730.5-201ENST00000530288 346 ntBASIC20.22■□□□□ 0.83
SEMA3EO15041 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
SEMA3EO15041 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SEMA3EO15041 AC093512.1-201ENST00000617969 520 ntBASIC20.22■□□□□ 0.83
SEMA3EO15041 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SEMA3EO15041 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SEMA3EO15041 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
SEMA3EO15041 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SEMA3EO15041 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC20.22■□□□□ 0.83
SEMA3EO15041 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
SEMA3EO15041 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
SEMA3EO15041 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
SEMA3EO15041 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
SEMA3EO15041 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SEMA3EO15041 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SEMA3EO15041 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC20.22■□□□□ 0.83
SEMA3EO15041 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC20.22■□□□□ 0.83
SEMA3EO15041 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC20.22■□□□□ 0.83
SEMA3EO15041 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC20.22■□□□□ 0.83
SEMA3EO15041 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SEMA3EO15041 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SEMA3EO15041 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
SEMA3EO15041 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
SEMA3EO15041 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
SEMA3EO15041 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC20.21■□□□□ 0.83
SEMA3EO15041 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SEMA3EO15041 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC20.21■□□□□ 0.83
SEMA3EO15041 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SEMA3EO15041 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SEMA3EO15041 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SEMA3EO15041 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC20.21■□□□□ 0.83
SEMA3EO15041 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC20.21■□□□□ 0.83
SEMA3EO15041 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC20.21■□□□□ 0.83
SEMA3EO15041 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SEMA3EO15041 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC20.21■□□□□ 0.83
SEMA3EO15041 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC20.21■□□□□ 0.83
SEMA3EO15041 AL138918.1-201ENST00000568306 659 ntBASIC20.21■□□□□ 0.83
SEMA3EO15041 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC20.21■□□□□ 0.83
SEMA3EO15041 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC20.21■□□□□ 0.83
SEMA3EO15041 NARF-206ENST00000457415 1668 ntTSL 5 BASIC20.21■□□□□ 0.83
SEMA3EO15041 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SEMA3EO15041 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
SEMA3EO15041 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SEMA3EO15041 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC20.21■□□□□ 0.83
SEMA3EO15041 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
SEMA3EO15041 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SEMA3EO15041 PCDHB17P-201ENST00000539533 2393 ntBASIC20.21■□□□□ 0.83
SEMA3EO15041 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC20.2■□□□□ 0.83
SEMA3EO15041 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC20.2■□□□□ 0.82
SEMA3EO15041 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
SEMA3EO15041 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC20.2■□□□□ 0.82
SEMA3EO15041 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SEMA3EO15041 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
SEMA3EO15041 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SEMA3EO15041 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC20.2■□□□□ 0.82
SEMA3EO15041 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
SEMA3EO15041 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SEMA3EO15041 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
SEMA3EO15041 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SEMA3EO15041 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SEMA3EO15041 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SEMA3EO15041 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SEMA3EO15041 HLA-DRB6-201ENST00000411500 1235 ntBASIC20.2■□□□□ 0.82
SEMA3EO15041 SYS1-203ENST00000414310 795 ntTSL 3 BASIC20.2■□□□□ 0.82
SEMA3EO15041 SPDYE7P-202ENST00000420373 878 ntBASIC20.2■□□□□ 0.82
SEMA3EO15041 AC142381.1-201ENST00000426099 345 ntBASIC20.2■□□□□ 0.82
SEMA3EO15041 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC20.2■□□□□ 0.82
SEMA3EO15041 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC20.2■□□□□ 0.82
SEMA3EO15041 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC20.2■□□□□ 0.82
SEMA3EO15041 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
SEMA3EO15041 ALG1L8P-201ENST00000533887 760 ntBASIC20.2■□□□□ 0.82
SEMA3EO15041 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC20.2■□□□□ 0.82
SEMA3EO15041 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SEMA3EO15041 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC20.2■□□□□ 0.82
SEMA3EO15041 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SEMA3EO15041 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC20.2■□□□□ 0.82
SEMA3EO15041 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SEMA3EO15041 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SEMA3EO15041 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SEMA3EO15041 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
SEMA3EO15041 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SEMA3EO15041 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SEMA3EO15041 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms