Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ATP2A1O14983 UXT-AS1-201ENST00000590504 1525 ntBASIC19.27■□□□□ 0.68
ATP2A1O14983 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ATP2A1O14983 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ATP2A1O14983 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ATP2A1O14983 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ATP2A1O14983 LINC00895-201ENST00000629028 1637 ntBASIC19.27■□□□□ 0.68
ATP2A1O14983 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ATP2A1O14983 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ATP2A1O14983 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC19.27■□□□□ 0.68
ATP2A1O14983 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ATP2A1O14983 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC19.27■□□□□ 0.68
ATP2A1O14983 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ATP2A1O14983 CD276-203ENST00000537340 2439 ntTSL 2 BASIC19.27■□□□□ 0.68
ATP2A1O14983 LINC02012-201ENST00000608206 1725 ntBASIC19.27■□□□□ 0.68
ATP2A1O14983 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
ATP2A1O14983 NOC2LP2-201ENST00000407594 1944 ntBASIC19.27■□□□□ 0.67
ATP2A1O14983 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC19.27■□□□□ 0.67
ATP2A1O14983 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
ATP2A1O14983 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC19.27■□□□□ 0.67
ATP2A1O14983 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC19.26■□□□□ 0.67
ATP2A1O14983 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC19.26■□□□□ 0.67
ATP2A1O14983 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ATP2A1O14983 AC005332.8-201ENST00000622750 2735 ntBASIC19.26■□□□□ 0.67
ATP2A1O14983 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
ATP2A1O14983 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ATP2A1O14983 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC19.26■□□□□ 0.67
ATP2A1O14983 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC19.26■□□□□ 0.67
ATP2A1O14983 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ATP2A1O14983 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC19.26■□□□□ 0.67
ATP2A1O14983 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC19.26■□□□□ 0.67
ATP2A1O14983 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC19.26■□□□□ 0.67
ATP2A1O14983 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC19.26■□□□□ 0.67
ATP2A1O14983 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ATP2A1O14983 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC19.26■□□□□ 0.67
ATP2A1O14983 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC19.26■□□□□ 0.67
ATP2A1O14983 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
ATP2A1O14983 KLF2P3-201ENST00000451977 1087 ntBASIC19.26■□□□□ 0.67
ATP2A1O14983 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC19.26■□□□□ 0.67
ATP2A1O14983 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC19.26■□□□□ 0.67
ATP2A1O14983 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC19.26■□□□□ 0.67
ATP2A1O14983 AC021097.1-201ENST00000607902 574 ntBASIC19.26■□□□□ 0.67
ATP2A1O14983 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC19.26■□□□□ 0.67
ATP2A1O14983 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC19.26■□□□□ 0.67
ATP2A1O14983 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
ATP2A1O14983 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ATP2A1O14983 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
ATP2A1O14983 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ATP2A1O14983 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC19.26■□□□□ 0.67
ATP2A1O14983 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ATP2A1O14983 AC016027.1-202ENST00000607927 1699 ntBASIC19.26■□□□□ 0.67
ATP2A1O14983 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
ATP2A1O14983 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ATP2A1O14983 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
ATP2A1O14983 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
ATP2A1O14983 SLC9A3P2-201ENST00000447821 2021 ntBASIC19.25■□□□□ 0.67
ATP2A1O14983 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
ATP2A1O14983 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC19.25■□□□□ 0.67
ATP2A1O14983 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
ATP2A1O14983 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC19.25■□□□□ 0.67
ATP2A1O14983 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC19.25■□□□□ 0.67
ATP2A1O14983 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ATP2A1O14983 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ATP2A1O14983 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ATP2A1O14983 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC19.25■□□□□ 0.67
ATP2A1O14983 CALY-203ENST00000368558 825 ntTSL 5 BASIC19.25■□□□□ 0.67
ATP2A1O14983 SPDYE7P-202ENST00000420373 878 ntBASIC19.25■□□□□ 0.67
ATP2A1O14983 AC055876.3-201ENST00000431496 288 ntBASIC19.25■□□□□ 0.67
ATP2A1O14983 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ATP2A1O14983 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC19.25■□□□□ 0.67
ATP2A1O14983 RNA5SP421-201ENST00000516864 134 ntBASIC19.25■□□□□ 0.67
ATP2A1O14983 SLC25A39P2-201ENST00000537614 270 ntBASIC19.25■□□□□ 0.67
ATP2A1O14983 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC19.25■□□□□ 0.67
ATP2A1O14983 AC027307.2-201ENST00000591252 911 ntBASIC19.25■□□□□ 0.67
ATP2A1O14983 AC138649.4-201ENST00000612222 287 ntBASIC19.25■□□□□ 0.67
ATP2A1O14983 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ATP2A1O14983 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ATP2A1O14983 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ATP2A1O14983 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ATP2A1O14983 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC19.25■□□□□ 0.67
ATP2A1O14983 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
ATP2A1O14983 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
ATP2A1O14983 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ATP2A1O14983 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC19.25■□□□□ 0.67
ATP2A1O14983 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC19.25■□□□□ 0.67
ATP2A1O14983 AC108860.2-201ENST00000562760 2183 ntBASIC19.25■□□□□ 0.67
ATP2A1O14983 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
ATP2A1O14983 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ATP2A1O14983 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
ATP2A1O14983 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
ATP2A1O14983 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ATP2A1O14983 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC19.24■□□□□ 0.67
ATP2A1O14983 LINC00896-202ENST00000609602 2128 ntBASIC19.24■□□□□ 0.67
ATP2A1O14983 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
ATP2A1O14983 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC19.24■□□□□ 0.67
ATP2A1O14983 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ATP2A1O14983 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC19.24■□□□□ 0.67
ATP2A1O14983 AL133373.2-201ENST00000623187 2828 ntBASIC19.24■□□□□ 0.67
ATP2A1O14983 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ATP2A1O14983 WRB-204ENST00000398753 699 ntTSL 3 BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms