Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 MPDU1-223ENST00000582151 728 ntBASIC18.98■□□□□ 0.63
DDX39AO00148 AP001160.2-201ENST00000596071 487 ntBASIC18.98■□□□□ 0.63
DDX39AO00148 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC18.98■□□□□ 0.63
DDX39AO00148 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC18.98■□□□□ 0.63
DDX39AO00148 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC18.98■□□□□ 0.63
DDX39AO00148 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
DDX39AO00148 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
DDX39AO00148 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
DDX39AO00148 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
DDX39AO00148 AC131009.4-201ENST00000624048 1740 ntBASIC18.97■□□□□ 0.63
DDX39AO00148 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
DDX39AO00148 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
DDX39AO00148 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
DDX39AO00148 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
DDX39AO00148 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC18.97■□□□□ 0.63
DDX39AO00148 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
DDX39AO00148 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
DDX39AO00148 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
DDX39AO00148 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
DDX39AO00148 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
DDX39AO00148 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC18.97■□□□□ 0.63
DDX39AO00148 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC18.97■□□□□ 0.63
DDX39AO00148 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
DDX39AO00148 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC18.97■□□□□ 0.63
DDX39AO00148 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC18.97■□□□□ 0.63
DDX39AO00148 WT1-AS_2.1-201ENST00000613208 137 ntBASIC18.97■□□□□ 0.63
DDX39AO00148 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC18.97■□□□□ 0.63
DDX39AO00148 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
DDX39AO00148 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
DDX39AO00148 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
DDX39AO00148 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
DDX39AO00148 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC18.97■□□□□ 0.63
DDX39AO00148 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
DDX39AO00148 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
DDX39AO00148 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
DDX39AO00148 PCDHB17P-201ENST00000539533 2393 ntBASIC18.97■□□□□ 0.63
DDX39AO00148 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC18.97■□□□□ 0.63
DDX39AO00148 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
DDX39AO00148 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
DDX39AO00148 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
DDX39AO00148 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC18.96■□□□□ 0.63
DDX39AO00148 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
DDX39AO00148 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
DDX39AO00148 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
DDX39AO00148 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
DDX39AO00148 AC026471.1-201ENST00000564629 3026 ntBASIC18.96■□□□□ 0.63
DDX39AO00148 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
DDX39AO00148 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
DDX39AO00148 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
DDX39AO00148 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
DDX39AO00148 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
DDX39AO00148 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
DDX39AO00148 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
DDX39AO00148 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC18.96■□□□□ 0.63
DDX39AO00148 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
DDX39AO00148 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC18.96■□□□□ 0.63
DDX39AO00148 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC18.96■□□□□ 0.63
DDX39AO00148 AC140658.5-201ENST00000438532 169 ntBASIC18.96■□□□□ 0.63
DDX39AO00148 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC18.96■□□□□ 0.63
DDX39AO00148 AC092183.1-201ENST00000469884 875 ntBASIC18.96■□□□□ 0.63
DDX39AO00148 AC112191.1-201ENST00000523689 701 ntBASIC18.96■□□□□ 0.63
DDX39AO00148 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC18.96■□□□□ 0.63
DDX39AO00148 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
DDX39AO00148 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC18.96■□□□□ 0.63
DDX39AO00148 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC18.96■□□□□ 0.63
DDX39AO00148 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
DDX39AO00148 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
DDX39AO00148 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
DDX39AO00148 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC18.96■□□□□ 0.63
DDX39AO00148 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
DDX39AO00148 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
DDX39AO00148 AP001094.4-201ENST00000579008 2176 ntBASIC18.96■□□□□ 0.63
DDX39AO00148 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
DDX39AO00148 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
DDX39AO00148 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
DDX39AO00148 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
DDX39AO00148 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
DDX39AO00148 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
DDX39AO00148 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
DDX39AO00148 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
DDX39AO00148 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC18.96■□□□□ 0.63
DDX39AO00148 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
DDX39AO00148 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
DDX39AO00148 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
DDX39AO00148 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
DDX39AO00148 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
DDX39AO00148 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
DDX39AO00148 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
DDX39AO00148 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
DDX39AO00148 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
DDX39AO00148 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC18.95■□□□□ 0.62
DDX39AO00148 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
DDX39AO00148 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
DDX39AO00148 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
DDX39AO00148 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
DDX39AO00148 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC18.95■□□□□ 0.62
DDX39AO00148 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC18.95■□□□□ 0.62
DDX39AO00148 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
DDX39AO00148 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC18.95■□□□□ 0.62
DDX39AO00148 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms