Protein–RNA interactions for Protein: A6XGL0

YJEFN3, YjeF N-terminal domain-containing protein 3, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YJEFN3A6XGL0 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
YJEFN3A6XGL0 SNX33P1-201ENST00000592116 1762 ntBASIC17.58■□□□□ 0.4
YJEFN3A6XGL0 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
YJEFN3A6XGL0 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
YJEFN3A6XGL0 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
YJEFN3A6XGL0 PCDHA12-202ENST00000613593 2588 ntBASIC17.57■□□□□ 0.4
YJEFN3A6XGL0 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
YJEFN3A6XGL0 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
YJEFN3A6XGL0 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
YJEFN3A6XGL0 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
YJEFN3A6XGL0 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC17.57■□□□□ 0.4
YJEFN3A6XGL0 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC17.57■□□□□ 0.4
YJEFN3A6XGL0 AC140658.5-201ENST00000438532 169 ntBASIC17.57■□□□□ 0.4
YJEFN3A6XGL0 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC17.57■□□□□ 0.4
YJEFN3A6XGL0 DNAJB3-201ENST00000446806 729 ntBASIC17.57■□□□□ 0.4
YJEFN3A6XGL0 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC17.57■□□□□ 0.4
YJEFN3A6XGL0 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
YJEFN3A6XGL0 MTRF1LP2-201ENST00000506027 1122 ntBASIC17.57■□□□□ 0.4
YJEFN3A6XGL0 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC17.57■□□□□ 0.4
YJEFN3A6XGL0 C20orf181-201ENST00000623918 480 ntBASIC17.57■□□□□ 0.4
YJEFN3A6XGL0 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
YJEFN3A6XGL0 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
YJEFN3A6XGL0 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC17.57■□□□□ 0.4
YJEFN3A6XGL0 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
YJEFN3A6XGL0 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
YJEFN3A6XGL0 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
YJEFN3A6XGL0 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
YJEFN3A6XGL0 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
YJEFN3A6XGL0 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.57■□□□□ 0.4
YJEFN3A6XGL0 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.57■□□□□ 0.4
YJEFN3A6XGL0 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
YJEFN3A6XGL0 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
YJEFN3A6XGL0 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
YJEFN3A6XGL0 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
YJEFN3A6XGL0 AD000864.1-201ENST00000624076 2295 ntBASIC17.56■□□□□ 0.4
YJEFN3A6XGL0 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.56■□□□□ 0.4
YJEFN3A6XGL0 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
YJEFN3A6XGL0 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
YJEFN3A6XGL0 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
YJEFN3A6XGL0 AL603756.1-201ENST00000606511 2163 ntBASIC17.56■□□□□ 0.4
YJEFN3A6XGL0 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
YJEFN3A6XGL0 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
YJEFN3A6XGL0 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
YJEFN3A6XGL0 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
YJEFN3A6XGL0 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
YJEFN3A6XGL0 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
YJEFN3A6XGL0 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
YJEFN3A6XGL0 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
YJEFN3A6XGL0 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
YJEFN3A6XGL0 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC17.56■□□□□ 0.4
YJEFN3A6XGL0 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
YJEFN3A6XGL0 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
YJEFN3A6XGL0 RNU1-129P-201ENST00000384064 167 ntBASIC17.56■□□□□ 0.4
YJEFN3A6XGL0 UPF3AP3-201ENST00000420996 769 ntBASIC17.56■□□□□ 0.4
YJEFN3A6XGL0 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC17.56■□□□□ 0.4
YJEFN3A6XGL0 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC17.56■□□□□ 0.4
YJEFN3A6XGL0 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC17.56■□□□□ 0.4
YJEFN3A6XGL0 AP002490.2-201ENST00000524791 560 ntBASIC17.56■□□□□ 0.4
YJEFN3A6XGL0 THTPA-204ENST00000554970 569 ntTSL 4 BASIC17.56■□□□□ 0.4
YJEFN3A6XGL0 THTPA-206ENST00000556015 535 ntTSL 3 BASIC17.56■□□□□ 0.4
YJEFN3A6XGL0 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC17.56■□□□□ 0.4
YJEFN3A6XGL0 U1.21-201ENST00000580816 167 ntBASIC17.56■□□□□ 0.4
YJEFN3A6XGL0 AC091812.2-201ENST00000619081 385 ntBASIC17.56■□□□□ 0.4
YJEFN3A6XGL0 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
YJEFN3A6XGL0 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
YJEFN3A6XGL0 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
YJEFN3A6XGL0 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC17.56■□□□□ 0.4
YJEFN3A6XGL0 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
YJEFN3A6XGL0 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
YJEFN3A6XGL0 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
YJEFN3A6XGL0 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
YJEFN3A6XGL0 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC17.56■□□□□ 0.4
YJEFN3A6XGL0 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
YJEFN3A6XGL0 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.56■□□□□ 0.4
YJEFN3A6XGL0 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
YJEFN3A6XGL0 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
YJEFN3A6XGL0 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
YJEFN3A6XGL0 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
YJEFN3A6XGL0 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.55■□□□□ 0.4
YJEFN3A6XGL0 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.55■□□□□ 0.4
YJEFN3A6XGL0 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
YJEFN3A6XGL0 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
YJEFN3A6XGL0 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
YJEFN3A6XGL0 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
YJEFN3A6XGL0 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.55■□□□□ 0.4
YJEFN3A6XGL0 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
YJEFN3A6XGL0 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
YJEFN3A6XGL0 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
YJEFN3A6XGL0 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC17.55■□□□□ 0.4
YJEFN3A6XGL0 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
YJEFN3A6XGL0 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
YJEFN3A6XGL0 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
YJEFN3A6XGL0 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
YJEFN3A6XGL0 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
YJEFN3A6XGL0 FAM58CP-201ENST00000435741 640 ntBASIC17.55■□□□□ 0.4
YJEFN3A6XGL0 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC17.55■□□□□ 0.4
YJEFN3A6XGL0 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
YJEFN3A6XGL0 CD7-202ENST00000578509 925 ntTSL 3 BASIC17.55■□□□□ 0.4
YJEFN3A6XGL0 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
YJEFN3A6XGL0 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms