Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC22.62■■□□□ 1.21
SBNO1A3KN83 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
SBNO1A3KN83 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC22.61■■□□□ 1.21
SBNO1A3KN83 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
SBNO1A3KN83 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC22.61■■□□□ 1.21
SBNO1A3KN83 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
SBNO1A3KN83 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC22.61■■□□□ 1.21
SBNO1A3KN83 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
SBNO1A3KN83 STX3-203ENST00000529177 1571 ntTSL 2 BASIC22.61■■□□□ 1.21
SBNO1A3KN83 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
SBNO1A3KN83 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
SBNO1A3KN83 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
SBNO1A3KN83 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC22.61■■□□□ 1.21
SBNO1A3KN83 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC22.61■■□□□ 1.21
SBNO1A3KN83 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
SBNO1A3KN83 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
SBNO1A3KN83 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC22.61■■□□□ 1.21
SBNO1A3KN83 BOC-212ENST00000485230 2173 ntTSL 2 BASIC22.61■■□□□ 1.21
SBNO1A3KN83 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
SBNO1A3KN83 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC22.61■■□□□ 1.21
SBNO1A3KN83 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC22.61■■□□□ 1.21
SBNO1A3KN83 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC22.61■■□□□ 1.21
SBNO1A3KN83 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
SBNO1A3KN83 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
SBNO1A3KN83 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
SBNO1A3KN83 AL021920.2-201ENST00000624828 1351 ntBASIC22.61■■□□□ 1.21
SBNO1A3KN83 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SBNO1A3KN83 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC22.6■■□□□ 1.21
SBNO1A3KN83 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC22.6■■□□□ 1.21
SBNO1A3KN83 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
SBNO1A3KN83 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SBNO1A3KN83 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC22.6■■□□□ 1.21
SBNO1A3KN83 NEFHP1-201ENST00000412845 2629 ntBASIC22.6■■□□□ 1.21
SBNO1A3KN83 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
SBNO1A3KN83 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
SBNO1A3KN83 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SBNO1A3KN83 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
SBNO1A3KN83 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC22.6■■□□□ 1.21
SBNO1A3KN83 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
SBNO1A3KN83 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC22.6■■□□□ 1.21
SBNO1A3KN83 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
SBNO1A3KN83 AC011495.1-201ENST00000498085 584 ntBASIC22.6■■□□□ 1.21
SBNO1A3KN83 AC098859.1-201ENST00000502915 1238 ntBASIC22.6■■□□□ 1.21
SBNO1A3KN83 SPDYE18-201ENST00000510091 1050 ntBASIC22.6■■□□□ 1.21
SBNO1A3KN83 MAX-210ENST00000555419 765 ntTSL 5 BASIC22.6■■□□□ 1.21
SBNO1A3KN83 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
SBNO1A3KN83 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SBNO1A3KN83 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
SBNO1A3KN83 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC22.6■■□□□ 1.21
SBNO1A3KN83 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
SBNO1A3KN83 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
SBNO1A3KN83 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
SBNO1A3KN83 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC22.6■■□□□ 1.21
SBNO1A3KN83 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SBNO1A3KN83 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC22.6■■□□□ 1.21
SBNO1A3KN83 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SBNO1A3KN83 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SBNO1A3KN83 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
SBNO1A3KN83 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC22.59■■□□□ 1.21
SBNO1A3KN83 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SBNO1A3KN83 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
SBNO1A3KN83 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC22.59■■□□□ 1.21
SBNO1A3KN83 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC22.59■■□□□ 1.21
SBNO1A3KN83 AL023806.1-201ENST00000603994 1649 ntBASIC22.59■■□□□ 1.21
SBNO1A3KN83 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
SBNO1A3KN83 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
SBNO1A3KN83 GOLGA2P9-201ENST00000596977 1937 ntBASIC22.59■■□□□ 1.21
SBNO1A3KN83 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SBNO1A3KN83 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SBNO1A3KN83 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SBNO1A3KN83 RN7SL618P-201ENST00000477850 296 ntBASIC22.59■■□□□ 1.21
SBNO1A3KN83 DOC2GP-202ENST00000514950 1163 ntBASIC22.59■■□□□ 1.21
SBNO1A3KN83 KRT17P8-201ENST00000540749 863 ntBASIC22.59■■□□□ 1.21
SBNO1A3KN83 QPRT-203ENST00000562473 579 ntTSL 3 BASIC22.59■■□□□ 1.21
SBNO1A3KN83 NAA38-206ENST00000576384 424 ntTSL 2 BASIC22.59■■□□□ 1.21
SBNO1A3KN83 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC22.59■■□□□ 1.21
SBNO1A3KN83 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC22.59■■□□□ 1.21
SBNO1A3KN83 APOC4-201ENST00000591600 348 ntTSL 3 BASIC22.59■■□□□ 1.21
SBNO1A3KN83 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
SBNO1A3KN83 AC134043.2-201ENST00000624206 2238 ntBASIC22.59■■□□□ 1.21
SBNO1A3KN83 SLC7A15P-201ENST00000424028 1363 ntBASIC22.59■■□□□ 1.21
SBNO1A3KN83 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC22.59■■□□□ 1.21
SBNO1A3KN83 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC22.59■■□□□ 1.21
SBNO1A3KN83 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
SBNO1A3KN83 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SBNO1A3KN83 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
SBNO1A3KN83 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
SBNO1A3KN83 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
SBNO1A3KN83 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
SBNO1A3KN83 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
SBNO1A3KN83 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
SBNO1A3KN83 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
SBNO1A3KN83 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC22.58■■□□□ 1.21
SBNO1A3KN83 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
SBNO1A3KN83 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
SBNO1A3KN83 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC22.58■■□□□ 1.21
SBNO1A3KN83 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
SBNO1A3KN83 SPDYE19P-201ENST00000338590 713 ntBASIC22.58■■□□□ 1.21
SBNO1A3KN83 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC22.58■■□□□ 1.21
SBNO1A3KN83 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC22.58■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms