Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 AP002414.3-201ENST00000589352 1468 ntBASIC16.94■□□□□ 0.3
CCDC162PA2VCL2 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC16.94■□□□□ 0.3
CCDC162PA2VCL2 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CCDC162PA2VCL2 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CCDC162PA2VCL2 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC162PA2VCL2 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC162PA2VCL2 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC162PA2VCL2 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.94■□□□□ 0.3
CCDC162PA2VCL2 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC16.94■□□□□ 0.3
CCDC162PA2VCL2 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC16.94■□□□□ 0.3
CCDC162PA2VCL2 CENPM-204ENST00000402420 688 ntTSL 5 BASIC16.94■□□□□ 0.3
CCDC162PA2VCL2 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC16.94■□□□□ 0.3
CCDC162PA2VCL2 AC136632.2-201ENST00000512891 861 ntBASIC16.94■□□□□ 0.3
CCDC162PA2VCL2 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC16.94■□□□□ 0.3
CCDC162PA2VCL2 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
CCDC162PA2VCL2 AC105339.3-201ENST00000560043 636 ntBASIC16.94■□□□□ 0.3
CCDC162PA2VCL2 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC162PA2VCL2 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC16.94■□□□□ 0.3
CCDC162PA2VCL2 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CCDC162PA2VCL2 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC16.94■□□□□ 0.3
CCDC162PA2VCL2 AF228730.7-201ENST00000641842 219 ntBASIC16.94■□□□□ 0.3
CCDC162PA2VCL2 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC162PA2VCL2 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC162PA2VCL2 AC092171.3-201ENST00000610122 2651 ntBASIC16.94■□□□□ 0.3
CCDC162PA2VCL2 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC162PA2VCL2 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC16.94■□□□□ 0.3
CCDC162PA2VCL2 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC162PA2VCL2 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC16.94■□□□□ 0.3
CCDC162PA2VCL2 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.94■□□□□ 0.3
CCDC162PA2VCL2 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC16.94■□□□□ 0.3
CCDC162PA2VCL2 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CCDC162PA2VCL2 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CCDC162PA2VCL2 OR6D1P-203ENST00000641209 4860 ntBASIC16.93■□□□□ 0.3
CCDC162PA2VCL2 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CCDC162PA2VCL2 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC16.93■□□□□ 0.3
CCDC162PA2VCL2 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC162PA2VCL2 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC162PA2VCL2 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC162PA2VCL2 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC162PA2VCL2 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC162PA2VCL2 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.93■□□□□ 0.3
CCDC162PA2VCL2 AC002310.6-201ENST00000624451 1377 ntBASIC16.93■□□□□ 0.3
CCDC162PA2VCL2 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC16.93■□□□□ 0.3
CCDC162PA2VCL2 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC162PA2VCL2 PCDHA14-201ENST00000506751 2298 ntBASIC16.93■□□□□ 0.3
CCDC162PA2VCL2 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC162PA2VCL2 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC162PA2VCL2 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC162PA2VCL2 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC16.93■□□□□ 0.3
CCDC162PA2VCL2 PP7080-204ENST00000510714 601 ntTSL 3 BASIC16.93■□□□□ 0.3
CCDC162PA2VCL2 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC162PA2VCL2 AL160237.2-201ENST00000556165 472 ntBASIC16.93■□□□□ 0.3
CCDC162PA2VCL2 ETFA-208ENST00000559602 792 ntTSL 3 BASIC16.93■□□□□ 0.3
CCDC162PA2VCL2 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC16.93■□□□□ 0.3
CCDC162PA2VCL2 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC16.93■□□□□ 0.3
CCDC162PA2VCL2 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC162PA2VCL2 FAM215A-202ENST00000632077 792 ntBASIC16.93■□□□□ 0.3
CCDC162PA2VCL2 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC162PA2VCL2 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC16.93■□□□□ 0.3
CCDC162PA2VCL2 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC162PA2VCL2 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.93■□□□□ 0.3
CCDC162PA2VCL2 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC162PA2VCL2 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC162PA2VCL2 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CCDC162PA2VCL2 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CCDC162PA2VCL2 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC162PA2VCL2 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC162PA2VCL2 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
CCDC162PA2VCL2 AL391256.1-201ENST00000443260 1855 ntBASIC16.93■□□□□ 0.3
CCDC162PA2VCL2 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
CCDC162PA2VCL2 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
CCDC162PA2VCL2 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
CCDC162PA2VCL2 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC162PA2VCL2 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC162PA2VCL2 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
CCDC162PA2VCL2 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC16.92■□□□□ 0.3
CCDC162PA2VCL2 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC162PA2VCL2 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC162PA2VCL2 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC162PA2VCL2 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC162PA2VCL2 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
CCDC162PA2VCL2 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC162PA2VCL2 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.92■□□□□ 0.3
CCDC162PA2VCL2 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
CCDC162PA2VCL2 INIP-202ENST00000374236 874 ntTSL 2 BASIC16.92■□□□□ 0.3
CCDC162PA2VCL2 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC16.92■□□□□ 0.3
CCDC162PA2VCL2 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC16.92■□□□□ 0.3
CCDC162PA2VCL2 SLC25A6P2-201ENST00000497974 877 ntBASIC16.92■□□□□ 0.3
CCDC162PA2VCL2 AP002490.2-201ENST00000524791 560 ntBASIC16.92■□□□□ 0.3
CCDC162PA2VCL2 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC16.92■□□□□ 0.3
CCDC162PA2VCL2 AL049840.3-201ENST00000602669 611 ntBASIC16.92■□□□□ 0.3
CCDC162PA2VCL2 AL356488.2-201ENST00000602755 427 ntBASIC16.92■□□□□ 0.3
CCDC162PA2VCL2 MIR1199-201ENST00000621445 119 ntBASIC16.92■□□□□ 0.3
CCDC162PA2VCL2 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC16.92■□□□□ 0.3
CCDC162PA2VCL2 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC16.92■□□□□ 0.3
CCDC162PA2VCL2 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC16.92■□□□□ 0.3
CCDC162PA2VCL2 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC162PA2VCL2 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC162PA2VCL2 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC162PA2VCL2 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms