Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SHISA3A0PJX4 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
SHISA3A0PJX4 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SHISA3A0PJX4 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SHISA3A0PJX4 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC14.76□□□□□ -0.05
SHISA3A0PJX4 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SHISA3A0PJX4 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC14.76□□□□□ -0.05
SHISA3A0PJX4 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC14.76□□□□□ -0.05
SHISA3A0PJX4 AP002414.2-201ENST00000591780 3365 ntBASIC14.76□□□□□ -0.05
SHISA3A0PJX4 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC14.76□□□□□ -0.05
SHISA3A0PJX4 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SHISA3A0PJX4 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC14.76□□□□□ -0.05
SHISA3A0PJX4 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SHISA3A0PJX4 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
SHISA3A0PJX4 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC14.75□□□□□ -0.05
SHISA3A0PJX4 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SHISA3A0PJX4 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SHISA3A0PJX4 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
SHISA3A0PJX4 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC14.75□□□□□ -0.05
SHISA3A0PJX4 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC14.75□□□□□ -0.05
SHISA3A0PJX4 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SHISA3A0PJX4 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SHISA3A0PJX4 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
SHISA3A0PJX4 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SHISA3A0PJX4 AC006449.6-201ENST00000612330 2296 ntBASIC14.75□□□□□ -0.05
SHISA3A0PJX4 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
SHISA3A0PJX4 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SHISA3A0PJX4 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SHISA3A0PJX4 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SHISA3A0PJX4 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SHISA3A0PJX4 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
SHISA3A0PJX4 COPE-203ENST00000351079 907 ntTSL 2 BASIC14.75□□□□□ -0.05
SHISA3A0PJX4 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SHISA3A0PJX4 FAM220CP-201ENST00000395253 831 ntBASIC14.75□□□□□ -0.05
SHISA3A0PJX4 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC14.75□□□□□ -0.05
SHISA3A0PJX4 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
SHISA3A0PJX4 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SHISA3A0PJX4 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SHISA3A0PJX4 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SHISA3A0PJX4 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC14.75□□□□□ -0.05
SHISA3A0PJX4 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC14.75□□□□□ -0.05
SHISA3A0PJX4 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
SHISA3A0PJX4 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SHISA3A0PJX4 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SHISA3A0PJX4 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC14.75□□□□□ -0.05
SHISA3A0PJX4 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SHISA3A0PJX4 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC14.75□□□□□ -0.05
SHISA3A0PJX4 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
SHISA3A0PJX4 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SHISA3A0PJX4 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SHISA3A0PJX4 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SHISA3A0PJX4 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
SHISA3A0PJX4 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SHISA3A0PJX4 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC14.75□□□□□ -0.05
SHISA3A0PJX4 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
SHISA3A0PJX4 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC14.75□□□□□ -0.05
SHISA3A0PJX4 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC14.75□□□□□ -0.05
SHISA3A0PJX4 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SHISA3A0PJX4 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SHISA3A0PJX4 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SHISA3A0PJX4 AL671710.1-201ENST00000610245 2349 ntBASIC14.75□□□□□ -0.05
SHISA3A0PJX4 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SHISA3A0PJX4 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SHISA3A0PJX4 STK24-203ENST00000397517 4578 ntTSL 2 BASIC14.75□□□□□ -0.05
SHISA3A0PJX4 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SHISA3A0PJX4 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SHISA3A0PJX4 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SHISA3A0PJX4 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC14.74□□□□□ -0.05
SHISA3A0PJX4 LINC01568-207ENST00000641790 1380 ntBASIC14.74□□□□□ -0.05
SHISA3A0PJX4 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SHISA3A0PJX4 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC14.74□□□□□ -0.05
SHISA3A0PJX4 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SHISA3A0PJX4 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC14.74□□□□□ -0.05
SHISA3A0PJX4 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SHISA3A0PJX4 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC14.74□□□□□ -0.05
SHISA3A0PJX4 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
SHISA3A0PJX4 UBC-206ENST00000538617 1303 ntTSL 5 BASIC14.74□□□□□ -0.05
SHISA3A0PJX4 PPT1-215ENST00000641471 2368 ntBASIC14.74□□□□□ -0.05
SHISA3A0PJX4 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
SHISA3A0PJX4 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
SHISA3A0PJX4 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SHISA3A0PJX4 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC14.74□□□□□ -0.05
SHISA3A0PJX4 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC14.74□□□□□ -0.05
SHISA3A0PJX4 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SHISA3A0PJX4 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC14.74□□□□□ -0.05
SHISA3A0PJX4 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SHISA3A0PJX4 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC14.74□□□□□ -0.05
SHISA3A0PJX4 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC14.74□□□□□ -0.05
SHISA3A0PJX4 HBZP1-201ENST00000354915 429 ntBASIC14.74□□□□□ -0.05
SHISA3A0PJX4 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SHISA3A0PJX4 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SHISA3A0PJX4 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC14.74□□□□□ -0.05
SHISA3A0PJX4 SNX5-210ENST00000481323 562 ntTSL 3 BASIC14.74□□□□□ -0.05
SHISA3A0PJX4 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC14.74□□□□□ -0.05
SHISA3A0PJX4 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
SHISA3A0PJX4 ARL16-209ENST00000573715 763 ntTSL 3 BASIC14.74□□□□□ -0.05
SHISA3A0PJX4 ARL16-211ENST00000576135 694 ntTSL 3 BASIC14.74□□□□□ -0.05
SHISA3A0PJX4 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
SHISA3A0PJX4 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SHISA3A0PJX4 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms