Protein–RNA interactions for Protein: A0A0J9YWF9

TRBV2, T-cell receptor beta variable 2 (Fragment), humanhuman

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV2A0A0J9YWF9 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC15.02□□□□□ -0.01
TRBV2A0A0J9YWF9 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
TRBV2A0A0J9YWF9 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
TRBV2A0A0J9YWF9 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRBV2A0A0J9YWF9 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRBV2A0A0J9YWF9 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
TRBV2A0A0J9YWF9 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC15.02□□□□□ -0.01
TRBV2A0A0J9YWF9 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC15.02□□□□□ -0.01
TRBV2A0A0J9YWF9 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRBV2A0A0J9YWF9 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
TRBV2A0A0J9YWF9 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC15.01□□□□□ -0.01
TRBV2A0A0J9YWF9 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC15.01□□□□□ -0.01
TRBV2A0A0J9YWF9 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TRBV2A0A0J9YWF9 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRBV2A0A0J9YWF9 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRBV2A0A0J9YWF9 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRBV2A0A0J9YWF9 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
TRBV2A0A0J9YWF9 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRBV2A0A0J9YWF9 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRBV2A0A0J9YWF9 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
TRBV2A0A0J9YWF9 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.01□□□□□ -0.01
TRBV2A0A0J9YWF9 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
TRBV2A0A0J9YWF9 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
TRBV2A0A0J9YWF9 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRBV2A0A0J9YWF9 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRBV2A0A0J9YWF9 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRBV2A0A0J9YWF9 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRBV2A0A0J9YWF9 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRBV2A0A0J9YWF9 GCK-202ENST00000345378 2421 ntTSL 2 BASIC15.01□□□□□ -0.01
TRBV2A0A0J9YWF9 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRBV2A0A0J9YWF9 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
TRBV2A0A0J9YWF9 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRBV2A0A0J9YWF9 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TRBV2A0A0J9YWF9 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRBV2A0A0J9YWF9 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TRBV2A0A0J9YWF9 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC15.01□□□□□ -0.01
TRBV2A0A0J9YWF9 KLF4P1-201ENST00000412782 1185 ntBASIC15.01□□□□□ -0.01
TRBV2A0A0J9YWF9 NKTR-203ENST00000442970 646 ntTSL 2 BASIC15.01□□□□□ -0.01
TRBV2A0A0J9YWF9 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC15.01□□□□□ -0.01
TRBV2A0A0J9YWF9 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC15.01□□□□□ -0.01
TRBV2A0A0J9YWF9 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC15.01□□□□□ -0.01
TRBV2A0A0J9YWF9 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC15.01□□□□□ -0.01
TRBV2A0A0J9YWF9 AL353801.3-201ENST00000609898 542 ntBASIC15.01□□□□□ -0.01
TRBV2A0A0J9YWF9 AC083849.1-201ENST00000615227 514 ntBASIC15.01□□□□□ -0.01
TRBV2A0A0J9YWF9 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC15.01□□□□□ -0.01
TRBV2A0A0J9YWF9 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
TRBV2A0A0J9YWF9 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC15.01□□□□□ -0.01
TRBV2A0A0J9YWF9 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRBV2A0A0J9YWF9 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC15.01□□□□□ -0.01
TRBV2A0A0J9YWF9 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TRBV2A0A0J9YWF9 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TRBV2A0A0J9YWF9 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TRBV2A0A0J9YWF9 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRBV2A0A0J9YWF9 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
TRBV2A0A0J9YWF9 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
TRBV2A0A0J9YWF9 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TRBV2A0A0J9YWF9 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
TRBV2A0A0J9YWF9 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRBV2A0A0J9YWF9 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TRBV2A0A0J9YWF9 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
TRBV2A0A0J9YWF9 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRBV2A0A0J9YWF9 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TRBV2A0A0J9YWF9 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRBV2A0A0J9YWF9 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRBV2A0A0J9YWF9 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC15□□□□□ -0.01
TRBV2A0A0J9YWF9 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRBV2A0A0J9YWF9 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15□□□□□ -0.01
TRBV2A0A0J9YWF9 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC15□□□□□ -0.01
TRBV2A0A0J9YWF9 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC15□□□□□ -0.01
TRBV2A0A0J9YWF9 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRBV2A0A0J9YWF9 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC15□□□□□ -0.01
TRBV2A0A0J9YWF9 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC15□□□□□ -0.01
TRBV2A0A0J9YWF9 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC15□□□□□ -0.01
TRBV2A0A0J9YWF9 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRBV2A0A0J9YWF9 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC15□□□□□ -0.01
TRBV2A0A0J9YWF9 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC15□□□□□ -0.01
TRBV2A0A0J9YWF9 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC15□□□□□ -0.01
TRBV2A0A0J9YWF9 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
TRBV2A0A0J9YWF9 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC15□□□□□ -0.01
TRBV2A0A0J9YWF9 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
TRBV2A0A0J9YWF9 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC15□□□□□ -0.01
TRBV2A0A0J9YWF9 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
TRBV2A0A0J9YWF9 RCN1P1-201ENST00000400413 996 ntBASIC15□□□□□ -0.01
TRBV2A0A0J9YWF9 TSPY22P-201ENST00000427496 604 ntBASIC15□□□□□ -0.01
TRBV2A0A0J9YWF9 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
TRBV2A0A0J9YWF9 SPDYE13P-201ENST00000445314 798 ntBASIC15□□□□□ -0.01
TRBV2A0A0J9YWF9 AL671277.2-201ENST00000458060 996 ntBASIC15□□□□□ -0.01
TRBV2A0A0J9YWF9 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC15□□□□□ -0.01
TRBV2A0A0J9YWF9 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC15□□□□□ -0.01
TRBV2A0A0J9YWF9 CLN6-204ENST00000564752 900 ntTSL 3 BASIC15□□□□□ -0.01
TRBV2A0A0J9YWF9 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC15□□□□□ -0.01
TRBV2A0A0J9YWF9 RN7SL850P-201ENST00000579959 291 ntBASIC15□□□□□ -0.01
TRBV2A0A0J9YWF9 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC15□□□□□ -0.01
TRBV2A0A0J9YWF9 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC15□□□□□ -0.01
TRBV2A0A0J9YWF9 IGHV3-41-201ENST00000613121 348 ntBASIC15□□□□□ -0.01
TRBV2A0A0J9YWF9 CLN6-214ENST00000636314 442 ntTSL 3 BASIC15□□□□□ -0.01
TRBV2A0A0J9YWF9 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRBV2A0A0J9YWF9 AC132938.5-201ENST00000624980 1813 ntBASIC15□□□□□ -0.01
TRBV2A0A0J9YWF9 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
TRBV2A0A0J9YWF9 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms