Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV18A0A075B6X5 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC14.59□□□□□ -0.07
TRAV18A0A075B6X5 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV18A0A075B6X5 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV18A0A075B6X5 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC14.59□□□□□ -0.07
TRAV18A0A075B6X5 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC14.59□□□□□ -0.07
TRAV18A0A075B6X5 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
TRAV18A0A075B6X5 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.59□□□□□ -0.07
TRAV18A0A075B6X5 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC14.59□□□□□ -0.07
TRAV18A0A075B6X5 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV18A0A075B6X5 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV18A0A075B6X5 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV18A0A075B6X5 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV18A0A075B6X5 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC14.59□□□□□ -0.07
TRAV18A0A075B6X5 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV18A0A075B6X5 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV18A0A075B6X5 CD70-202ENST00000423145 881 ntTSL 2 BASIC14.59□□□□□ -0.07
TRAV18A0A075B6X5 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
TRAV18A0A075B6X5 SNORA78-201ENST00000459373 127 ntBASIC14.59□□□□□ -0.07
TRAV18A0A075B6X5 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
TRAV18A0A075B6X5 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV18A0A075B6X5 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC14.59□□□□□ -0.07
TRAV18A0A075B6X5 STK25P1-201ENST00000585406 838 ntBASIC14.59□□□□□ -0.07
TRAV18A0A075B6X5 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC14.59□□□□□ -0.07
TRAV18A0A075B6X5 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
TRAV18A0A075B6X5 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
TRAV18A0A075B6X5 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC14.59□□□□□ -0.07
TRAV18A0A075B6X5 FUT8-AS1-201ENST00000621019 1521 ntBASIC14.59□□□□□ -0.07
TRAV18A0A075B6X5 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
TRAV18A0A075B6X5 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC14.59□□□□□ -0.07
TRAV18A0A075B6X5 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV18A0A075B6X5 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
TRAV18A0A075B6X5 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
TRAV18A0A075B6X5 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
TRAV18A0A075B6X5 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV18A0A075B6X5 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV18A0A075B6X5 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV18A0A075B6X5 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV18A0A075B6X5 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC14.59□□□□□ -0.07
TRAV18A0A075B6X5 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC14.59□□□□□ -0.07
TRAV18A0A075B6X5 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
TRAV18A0A075B6X5 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV18A0A075B6X5 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
TRAV18A0A075B6X5 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV18A0A075B6X5 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC14.58□□□□□ -0.07
TRAV18A0A075B6X5 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
TRAV18A0A075B6X5 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC14.58□□□□□ -0.07
TRAV18A0A075B6X5 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14.58□□□□□ -0.07
TRAV18A0A075B6X5 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
TRAV18A0A075B6X5 KRT8P10-201ENST00000450021 1447 ntBASIC14.58□□□□□ -0.07
TRAV18A0A075B6X5 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
TRAV18A0A075B6X5 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.07
TRAV18A0A075B6X5 ME2P1-201ENST00000426028 1970 ntBASIC14.58□□□□□ -0.07
TRAV18A0A075B6X5 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC14.58□□□□□ -0.07
TRAV18A0A075B6X5 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
TRAV18A0A075B6X5 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV18A0A075B6X5 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC14.58□□□□□ -0.08
TRAV18A0A075B6X5 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV18A0A075B6X5 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
TRAV18A0A075B6X5 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC14.58□□□□□ -0.08
TRAV18A0A075B6X5 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV18A0A075B6X5 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV18A0A075B6X5 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC14.58□□□□□ -0.08
TRAV18A0A075B6X5 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV18A0A075B6X5 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
TRAV18A0A075B6X5 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV18A0A075B6X5 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV18A0A075B6X5 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV18A0A075B6X5 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV18A0A075B6X5 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC14.58□□□□□ -0.08
TRAV18A0A075B6X5 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC14.58□□□□□ -0.08
TRAV18A0A075B6X5 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV18A0A075B6X5 AC103564.2-201ENST00000432853 1299 ntBASIC14.58□□□□□ -0.08
TRAV18A0A075B6X5 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC14.58□□□□□ -0.08
TRAV18A0A075B6X5 TSPY15P-201ENST00000457163 923 ntBASIC14.58□□□□□ -0.08
TRAV18A0A075B6X5 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC14.58□□□□□ -0.08
TRAV18A0A075B6X5 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC14.58□□□□□ -0.08
TRAV18A0A075B6X5 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV18A0A075B6X5 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.58□□□□□ -0.08
TRAV18A0A075B6X5 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC14.58□□□□□ -0.08
TRAV18A0A075B6X5 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV18A0A075B6X5 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC14.58□□□□□ -0.08
TRAV18A0A075B6X5 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV18A0A075B6X5 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV18A0A075B6X5 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV18A0A075B6X5 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV18A0A075B6X5 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC14.58□□□□□ -0.08
TRAV18A0A075B6X5 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
TRAV18A0A075B6X5 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV18A0A075B6X5 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV18A0A075B6X5 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV18A0A075B6X5 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC14.58□□□□□ -0.08
TRAV18A0A075B6X5 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC14.58□□□□□ -0.08
TRAV18A0A075B6X5 BLK-205ENST00000529894 2017 ntTSL 5 BASIC14.58□□□□□ -0.08
TRAV18A0A075B6X5 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV18A0A075B6X5 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC14.58□□□□□ -0.08
TRAV18A0A075B6X5 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV18A0A075B6X5 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV18A0A075B6X5 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC14.57□□□□□ -0.08
TRAV18A0A075B6X5 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 189.2 ms