Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHB1Q9Y5F3 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHB1Q9Y5F3 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHB1Q9Y5F3 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHB1Q9Y5F3 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHB1Q9Y5F3 AC009053.2-201ENST00000563701 2365 ntBASIC16.92■□□□□ 0.3
PCDHB1Q9Y5F3 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
PCDHB1Q9Y5F3 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC16.92■□□□□ 0.3
PCDHB1Q9Y5F3 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHB1Q9Y5F3 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHB1Q9Y5F3 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHB1Q9Y5F3 ELK2BP-201ENST00000415014 1224 ntBASIC16.92■□□□□ 0.3
PCDHB1Q9Y5F3 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16.92■□□□□ 0.3
PCDHB1Q9Y5F3 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHB1Q9Y5F3 ARTN-206ENST00000472435 402 ntTSL 3 BASIC16.92■□□□□ 0.3
PCDHB1Q9Y5F3 AP002490.2-201ENST00000524791 560 ntBASIC16.92■□□□□ 0.3
PCDHB1Q9Y5F3 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC16.92■□□□□ 0.3
PCDHB1Q9Y5F3 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC16.92■□□□□ 0.3
PCDHB1Q9Y5F3 AC018845.2-201ENST00000568326 409 ntBASIC16.92■□□□□ 0.3
PCDHB1Q9Y5F3 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC16.92■□□□□ 0.3
PCDHB1Q9Y5F3 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHB1Q9Y5F3 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC16.92■□□□□ 0.3
PCDHB1Q9Y5F3 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHB1Q9Y5F3 AC004706.3-202ENST00000621574 984 ntBASIC16.92■□□□□ 0.3
PCDHB1Q9Y5F3 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHB1Q9Y5F3 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHB1Q9Y5F3 AC005915.1-201ENST00000624912 2018 ntBASIC16.92■□□□□ 0.3
PCDHB1Q9Y5F3 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHB1Q9Y5F3 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHB1Q9Y5F3 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC16.92■□□□□ 0.3
PCDHB1Q9Y5F3 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHB1Q9Y5F3 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHB1Q9Y5F3 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHB1Q9Y5F3 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHB1Q9Y5F3 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHB1Q9Y5F3 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHB1Q9Y5F3 AC002310.6-201ENST00000624451 1377 ntBASIC16.91■□□□□ 0.3
PCDHB1Q9Y5F3 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHB1Q9Y5F3 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
PCDHB1Q9Y5F3 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHB1Q9Y5F3 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
PCDHB1Q9Y5F3 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
PCDHB1Q9Y5F3 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHB1Q9Y5F3 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC16.91■□□□□ 0.3
PCDHB1Q9Y5F3 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC16.91■□□□□ 0.3
PCDHB1Q9Y5F3 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
PCDHB1Q9Y5F3 CRYGEP-201ENST00000412192 528 ntBASIC16.91■□□□□ 0.3
PCDHB1Q9Y5F3 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC16.91■□□□□ 0.3
PCDHB1Q9Y5F3 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC16.91■□□□□ 0.3
PCDHB1Q9Y5F3 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC16.91■□□□□ 0.3
PCDHB1Q9Y5F3 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHB1Q9Y5F3 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC16.91■□□□□ 0.3
PCDHB1Q9Y5F3 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC16.91■□□□□ 0.3
PCDHB1Q9Y5F3 MIR4751-201ENST00000578027 74 ntBASIC16.91■□□□□ 0.3
PCDHB1Q9Y5F3 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC16.91■□□□□ 0.3
PCDHB1Q9Y5F3 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC16.91■□□□□ 0.3
PCDHB1Q9Y5F3 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
PCDHB1Q9Y5F3 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHB1Q9Y5F3 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.91■□□□□ 0.3
PCDHB1Q9Y5F3 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC16.91■□□□□ 0.3
PCDHB1Q9Y5F3 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.91■□□□□ 0.3
PCDHB1Q9Y5F3 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC16.91■□□□□ 0.3
PCDHB1Q9Y5F3 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
PCDHB1Q9Y5F3 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHB1Q9Y5F3 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
PCDHB1Q9Y5F3 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
PCDHB1Q9Y5F3 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.91■□□□□ 0.3
PCDHB1Q9Y5F3 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
PCDHB1Q9Y5F3 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHB1Q9Y5F3 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHB1Q9Y5F3 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.91■□□□□ 0.3
PCDHB1Q9Y5F3 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHB1Q9Y5F3 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
PCDHB1Q9Y5F3 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
PCDHB1Q9Y5F3 AL021920.2-201ENST00000624828 1351 ntBASIC16.9■□□□□ 0.3
PCDHB1Q9Y5F3 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.9■□□□□ 0.3
PCDHB1Q9Y5F3 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.9■□□□□ 0.3
PCDHB1Q9Y5F3 AC006504.4-201ENST00000592118 1568 ntBASIC16.9■□□□□ 0.3
PCDHB1Q9Y5F3 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHB1Q9Y5F3 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
PCDHB1Q9Y5F3 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHB1Q9Y5F3 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHB1Q9Y5F3 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHB1Q9Y5F3 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHB1Q9Y5F3 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC16.9■□□□□ 0.3
PCDHB1Q9Y5F3 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHB1Q9Y5F3 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC16.9■□□□□ 0.3
PCDHB1Q9Y5F3 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC16.9■□□□□ 0.3
PCDHB1Q9Y5F3 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHB1Q9Y5F3 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHB1Q9Y5F3 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC16.9■□□□□ 0.3
PCDHB1Q9Y5F3 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC16.9■□□□□ 0.3
PCDHB1Q9Y5F3 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
PCDHB1Q9Y5F3 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHB1Q9Y5F3 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHB1Q9Y5F3 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
PCDHB1Q9Y5F3 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC16.9■□□□□ 0.3
PCDHB1Q9Y5F3 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC16.9■□□□□ 0.3
PCDHB1Q9Y5F3 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHB1Q9Y5F3 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms