Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 AC027796.2-201ENST00000575326 344 ntBASIC15.64■□□□□ 0.09
NPIPA1Q9UND3 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NPIPA1Q9UND3 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
NPIPA1Q9UND3 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
NPIPA1Q9UND3 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
NPIPA1Q9UND3 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
NPIPA1Q9UND3 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NPIPA1Q9UND3 KRT18P28-201ENST00000453838 1332 ntBASIC15.64■□□□□ 0.09
NPIPA1Q9UND3 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
NPIPA1Q9UND3 AC012313.1-201ENST00000593393 3059 ntBASIC15.64■□□□□ 0.09
NPIPA1Q9UND3 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC15.64■□□□□ 0.09
NPIPA1Q9UND3 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
NPIPA1Q9UND3 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NPIPA1Q9UND3 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NPIPA1Q9UND3 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NPIPA1Q9UND3 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
NPIPA1Q9UND3 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
NPIPA1Q9UND3 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
NPIPA1Q9UND3 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
NPIPA1Q9UND3 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NPIPA1Q9UND3 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
NPIPA1Q9UND3 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NPIPA1Q9UND3 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NPIPA1Q9UND3 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
NPIPA1Q9UND3 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
NPIPA1Q9UND3 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
NPIPA1Q9UND3 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC15.63■□□□□ 0.09
NPIPA1Q9UND3 CEND1P1-201ENST00000451006 455 ntBASIC15.63■□□□□ 0.09
NPIPA1Q9UND3 YBX1P5-201ENST00000509441 847 ntBASIC15.63■□□□□ 0.09
NPIPA1Q9UND3 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC15.63■□□□□ 0.09
NPIPA1Q9UND3 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC15.63■□□□□ 0.09
NPIPA1Q9UND3 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC15.63■□□□□ 0.09
NPIPA1Q9UND3 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC15.63■□□□□ 0.09
NPIPA1Q9UND3 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC15.63■□□□□ 0.09
NPIPA1Q9UND3 AQP6-205ENST00000618286 829 ntTSL 5 BASIC15.63■□□□□ 0.09
NPIPA1Q9UND3 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
NPIPA1Q9UND3 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NPIPA1Q9UND3 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC15.63■□□□□ 0.09
NPIPA1Q9UND3 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
NPIPA1Q9UND3 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
NPIPA1Q9UND3 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
NPIPA1Q9UND3 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NPIPA1Q9UND3 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NPIPA1Q9UND3 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC15.63■□□□□ 0.09
NPIPA1Q9UND3 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
NPIPA1Q9UND3 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
NPIPA1Q9UND3 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NPIPA1Q9UND3 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
NPIPA1Q9UND3 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
NPIPA1Q9UND3 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC15.62■□□□□ 0.09
NPIPA1Q9UND3 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
NPIPA1Q9UND3 AC046185.3-201ENST00000623228 1824 ntBASIC15.62■□□□□ 0.09
NPIPA1Q9UND3 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC15.62■□□□□ 0.09
NPIPA1Q9UND3 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
NPIPA1Q9UND3 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC15.62■□□□□ 0.09
NPIPA1Q9UND3 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
NPIPA1Q9UND3 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
NPIPA1Q9UND3 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NPIPA1Q9UND3 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
NPIPA1Q9UND3 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NPIPA1Q9UND3 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC15.62■□□□□ 0.09
NPIPA1Q9UND3 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC15.62■□□□□ 0.09
NPIPA1Q9UND3 ACTG1P4-201ENST00000425123 1122 ntBASIC15.62■□□□□ 0.09
NPIPA1Q9UND3 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC15.62■□□□□ 0.09
NPIPA1Q9UND3 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC15.62■□□□□ 0.09
NPIPA1Q9UND3 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC15.62■□□□□ 0.09
NPIPA1Q9UND3 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC15.62■□□□□ 0.09
NPIPA1Q9UND3 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC15.62■□□□□ 0.09
NPIPA1Q9UND3 OR7E47P-204ENST00000575924 449 ntBASIC15.62■□□□□ 0.09
NPIPA1Q9UND3 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
NPIPA1Q9UND3 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NPIPA1Q9UND3 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
NPIPA1Q9UND3 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NPIPA1Q9UND3 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
NPIPA1Q9UND3 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
NPIPA1Q9UND3 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
NPIPA1Q9UND3 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC15.62■□□□□ 0.09
NPIPA1Q9UND3 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NPIPA1Q9UND3 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC15.62■□□□□ 0.09
NPIPA1Q9UND3 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC15.62■□□□□ 0.09
NPIPA1Q9UND3 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
NPIPA1Q9UND3 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
NPIPA1Q9UND3 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
NPIPA1Q9UND3 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
NPIPA1Q9UND3 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
NPIPA1Q9UND3 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NPIPA1Q9UND3 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NPIPA1Q9UND3 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
NPIPA1Q9UND3 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
NPIPA1Q9UND3 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
NPIPA1Q9UND3 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NPIPA1Q9UND3 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
NPIPA1Q9UND3 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC15.61■□□□□ 0.09
NPIPA1Q9UND3 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC15.61■□□□□ 0.09
NPIPA1Q9UND3 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
NPIPA1Q9UND3 PC-214ENST00000628663 1470 ntTSL 5 BASIC15.61■□□□□ 0.09
NPIPA1Q9UND3 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NPIPA1Q9UND3 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NPIPA1Q9UND3 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NPIPA1Q9UND3 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms