Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC20.05■□□□□ 0.8
CLIP2Q9UDT6 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLIP2Q9UDT6 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLIP2Q9UDT6 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC20.05■□□□□ 0.8
CLIP2Q9UDT6 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
CLIP2Q9UDT6 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLIP2Q9UDT6 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC20.05■□□□□ 0.8
CLIP2Q9UDT6 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLIP2Q9UDT6 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC20.04■□□□□ 0.8
CLIP2Q9UDT6 AL138688.1-201ENST00000624851 1594 ntBASIC20.04■□□□□ 0.8
CLIP2Q9UDT6 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLIP2Q9UDT6 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLIP2Q9UDT6 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC20.04■□□□□ 0.8
CLIP2Q9UDT6 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC20.04■□□□□ 0.8
CLIP2Q9UDT6 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CLIP2Q9UDT6 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CLIP2Q9UDT6 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC20.04■□□□□ 0.8
CLIP2Q9UDT6 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLIP2Q9UDT6 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLIP2Q9UDT6 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CLIP2Q9UDT6 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLIP2Q9UDT6 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CLIP2Q9UDT6 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CLIP2Q9UDT6 COA5-202ENST00000409997 557 ntTSL 4 BASIC20.04■□□□□ 0.8
CLIP2Q9UDT6 RPS8P6-201ENST00000426177 609 ntBASIC20.04■□□□□ 0.8
CLIP2Q9UDT6 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CLIP2Q9UDT6 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC20.04■□□□□ 0.8
CLIP2Q9UDT6 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC20.04■□□□□ 0.8
CLIP2Q9UDT6 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC20.04■□□□□ 0.8
CLIP2Q9UDT6 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC20.04■□□□□ 0.8
CLIP2Q9UDT6 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLIP2Q9UDT6 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
CLIP2Q9UDT6 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLIP2Q9UDT6 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLIP2Q9UDT6 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
CLIP2Q9UDT6 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC20.03■□□□□ 0.8
CLIP2Q9UDT6 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC20.03■□□□□ 0.8
CLIP2Q9UDT6 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLIP2Q9UDT6 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
CLIP2Q9UDT6 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLIP2Q9UDT6 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLIP2Q9UDT6 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
CLIP2Q9UDT6 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC20.03■□□□□ 0.8
CLIP2Q9UDT6 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC20.03■□□□□ 0.8
CLIP2Q9UDT6 PDPK2P-202ENST00000562415 1191 ntBASIC20.03■□□□□ 0.8
CLIP2Q9UDT6 AC005829.1-201ENST00000570002 483 ntBASIC20.03■□□□□ 0.8
CLIP2Q9UDT6 AC023141.13-201ENST00000604991 943 ntBASIC20.03■□□□□ 0.8
CLIP2Q9UDT6 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC20.03■□□□□ 0.8
CLIP2Q9UDT6 AC007064.4-201ENST00000637740 555 ntBASIC20.03■□□□□ 0.8
CLIP2Q9UDT6 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC20.03■□□□□ 0.8
CLIP2Q9UDT6 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC20.03■□□□□ 0.8
CLIP2Q9UDT6 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC20.03■□□□□ 0.8
CLIP2Q9UDT6 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLIP2Q9UDT6 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLIP2Q9UDT6 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC20.03■□□□□ 0.8
CLIP2Q9UDT6 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CLIP2Q9UDT6 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC20.03■□□□□ 0.8
CLIP2Q9UDT6 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
CLIP2Q9UDT6 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC20.02■□□□□ 0.8
CLIP2Q9UDT6 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC20.02■□□□□ 0.8
CLIP2Q9UDT6 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC20.02■□□□□ 0.8
CLIP2Q9UDT6 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CLIP2Q9UDT6 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CLIP2Q9UDT6 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
CLIP2Q9UDT6 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CLIP2Q9UDT6 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
CLIP2Q9UDT6 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CLIP2Q9UDT6 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CLIP2Q9UDT6 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
CLIP2Q9UDT6 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CLIP2Q9UDT6 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC20.02■□□□□ 0.8
CLIP2Q9UDT6 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CLIP2Q9UDT6 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CLIP2Q9UDT6 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
CLIP2Q9UDT6 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CLIP2Q9UDT6 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC20.02■□□□□ 0.8
CLIP2Q9UDT6 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC20.02■□□□□ 0.8
CLIP2Q9UDT6 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC20.02■□□□□ 0.8
CLIP2Q9UDT6 ALG1L5P-201ENST00000482043 771 ntBASIC20.02■□□□□ 0.8
CLIP2Q9UDT6 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC20.02■□□□□ 0.8
CLIP2Q9UDT6 SMN2-210ENST00000511812 867 ntTSL 2 BASIC20.02■□□□□ 0.8
CLIP2Q9UDT6 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC20.02■□□□□ 0.8
CLIP2Q9UDT6 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC20.02■□□□□ 0.8
CLIP2Q9UDT6 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC20.02■□□□□ 0.8
CLIP2Q9UDT6 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CLIP2Q9UDT6 AC134684.3-201ENST00000641758 218 ntBASIC20.02■□□□□ 0.8
CLIP2Q9UDT6 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CLIP2Q9UDT6 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
CLIP2Q9UDT6 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CLIP2Q9UDT6 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
CLIP2Q9UDT6 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
CLIP2Q9UDT6 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
CLIP2Q9UDT6 UBALD1-205ENST00000590891 2641 ntBASIC20.02■□□□□ 0.79
CLIP2Q9UDT6 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CLIP2Q9UDT6 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
CLIP2Q9UDT6 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.79
CLIP2Q9UDT6 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CLIP2Q9UDT6 AC016396.2-201ENST00000562575 1417 ntBASIC20.02■□□□□ 0.79
CLIP2Q9UDT6 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.79
CLIP2Q9UDT6 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms