Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 PCDHA12-202ENST00000613593 2588 ntBASIC20.53■□□□□ 0.88
HMG20BQ9P0W2 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
HMG20BQ9P0W2 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HMG20BQ9P0W2 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HMG20BQ9P0W2 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HMG20BQ9P0W2 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC20.53■□□□□ 0.88
HMG20BQ9P0W2 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC20.53■□□□□ 0.88
HMG20BQ9P0W2 AC254562.1-201ENST00000417586 456 ntBASIC20.53■□□□□ 0.88
HMG20BQ9P0W2 ADH5P3-201ENST00000433842 1137 ntBASIC20.53■□□□□ 0.88
HMG20BQ9P0W2 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
HMG20BQ9P0W2 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC20.53■□□□□ 0.88
HMG20BQ9P0W2 THTPA-204ENST00000554970 569 ntTSL 4 BASIC20.53■□□□□ 0.88
HMG20BQ9P0W2 THTPA-206ENST00000556015 535 ntTSL 3 BASIC20.53■□□□□ 0.88
HMG20BQ9P0W2 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC20.53■□□□□ 0.88
HMG20BQ9P0W2 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC20.53■□□□□ 0.88
HMG20BQ9P0W2 AC099522.2-201ENST00000607001 744 ntBASIC20.53■□□□□ 0.88
HMG20BQ9P0W2 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
HMG20BQ9P0W2 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
HMG20BQ9P0W2 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
HMG20BQ9P0W2 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HMG20BQ9P0W2 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC20.53■□□□□ 0.88
HMG20BQ9P0W2 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HMG20BQ9P0W2 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HMG20BQ9P0W2 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC20.53■□□□□ 0.88
HMG20BQ9P0W2 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC20.53■□□□□ 0.88
HMG20BQ9P0W2 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HMG20BQ9P0W2 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
HMG20BQ9P0W2 KRT8P49-201ENST00000604166 1432 ntBASIC20.53■□□□□ 0.88
HMG20BQ9P0W2 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC20.52■□□□□ 0.88
HMG20BQ9P0W2 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HMG20BQ9P0W2 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
HMG20BQ9P0W2 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HMG20BQ9P0W2 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HMG20BQ9P0W2 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
HMG20BQ9P0W2 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC20.52■□□□□ 0.88
HMG20BQ9P0W2 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC20.52■□□□□ 0.88
HMG20BQ9P0W2 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HMG20BQ9P0W2 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HMG20BQ9P0W2 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
HMG20BQ9P0W2 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HMG20BQ9P0W2 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC20.52■□□□□ 0.88
HMG20BQ9P0W2 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC20.52■□□□□ 0.88
HMG20BQ9P0W2 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
HMG20BQ9P0W2 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC20.52■□□□□ 0.88
HMG20BQ9P0W2 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC20.52■□□□□ 0.88
HMG20BQ9P0W2 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC20.52■□□□□ 0.88
HMG20BQ9P0W2 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.88
HMG20BQ9P0W2 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC20.52■□□□□ 0.88
HMG20BQ9P0W2 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
HMG20BQ9P0W2 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC20.52■□□□□ 0.88
HMG20BQ9P0W2 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
HMG20BQ9P0W2 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
HMG20BQ9P0W2 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
HMG20BQ9P0W2 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
HMG20BQ9P0W2 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
HMG20BQ9P0W2 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
HMG20BQ9P0W2 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC20.52■□□□□ 0.87
HMG20BQ9P0W2 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC20.52■□□□□ 0.87
HMG20BQ9P0W2 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC20.52■□□□□ 0.87
HMG20BQ9P0W2 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
HMG20BQ9P0W2 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HMG20BQ9P0W2 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HMG20BQ9P0W2 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC20.51■□□□□ 0.87
HMG20BQ9P0W2 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC20.51■□□□□ 0.87
HMG20BQ9P0W2 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HMG20BQ9P0W2 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HMG20BQ9P0W2 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HMG20BQ9P0W2 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
HMG20BQ9P0W2 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC20.51■□□□□ 0.87
HMG20BQ9P0W2 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
HMG20BQ9P0W2 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
HMG20BQ9P0W2 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC20.51■□□□□ 0.87
HMG20BQ9P0W2 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
HMG20BQ9P0W2 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
HMG20BQ9P0W2 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HMG20BQ9P0W2 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HMG20BQ9P0W2 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC20.51■□□□□ 0.87
HMG20BQ9P0W2 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
HMG20BQ9P0W2 AC112191.1-201ENST00000523689 701 ntBASIC20.51■□□□□ 0.87
HMG20BQ9P0W2 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
HMG20BQ9P0W2 IGHV3OR16-6-201ENST00000568775 360 ntBASIC20.51■□□□□ 0.87
HMG20BQ9P0W2 CD7-202ENST00000578509 925 ntTSL 3 BASIC20.51■□□□□ 0.87
HMG20BQ9P0W2 AC091167.2-201ENST00000579581 588 ntBASIC20.51■□□□□ 0.87
HMG20BQ9P0W2 MPDU1-223ENST00000582151 728 ntBASIC20.51■□□□□ 0.87
HMG20BQ9P0W2 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC20.51■□□□□ 0.87
HMG20BQ9P0W2 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HMG20BQ9P0W2 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC20.51■□□□□ 0.87
HMG20BQ9P0W2 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC20.51■□□□□ 0.87
HMG20BQ9P0W2 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
HMG20BQ9P0W2 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HMG20BQ9P0W2 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
HMG20BQ9P0W2 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
HMG20BQ9P0W2 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC20.51■□□□□ 0.87
HMG20BQ9P0W2 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
HMG20BQ9P0W2 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC20.51■□□□□ 0.87
HMG20BQ9P0W2 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC20.51■□□□□ 0.87
HMG20BQ9P0W2 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HMG20BQ9P0W2 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC20.51■□□□□ 0.87
HMG20BQ9P0W2 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC20.5■□□□□ 0.87
HMG20BQ9P0W2 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms