Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.15■□□□□ 0.34
HACD3Q9P035 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HACD3Q9P035 AC008894.3-201ENST00000624324 3103 ntBASIC17.15■□□□□ 0.34
HACD3Q9P035 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
HACD3Q9P035 F11R-206ENST00000621309 4770 ntTSL 5 BASIC17.15■□□□□ 0.34
HACD3Q9P035 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC17.15■□□□□ 0.34
HACD3Q9P035 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HACD3Q9P035 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HACD3Q9P035 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HACD3Q9P035 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HACD3Q9P035 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HACD3Q9P035 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC17.15■□□□□ 0.34
HACD3Q9P035 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
HACD3Q9P035 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
HACD3Q9P035 AL021920.2-201ENST00000624828 1351 ntBASIC17.15■□□□□ 0.34
HACD3Q9P035 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.34
HACD3Q9P035 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
HACD3Q9P035 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.14■□□□□ 0.33
HACD3Q9P035 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HACD3Q9P035 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HACD3Q9P035 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC17.14■□□□□ 0.33
HACD3Q9P035 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HACD3Q9P035 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.14■□□□□ 0.33
HACD3Q9P035 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.14■□□□□ 0.33
HACD3Q9P035 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HACD3Q9P035 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HACD3Q9P035 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
HACD3Q9P035 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC17.14■□□□□ 0.33
HACD3Q9P035 PAWRP1-201ENST00000451083 565 ntBASIC17.14■□□□□ 0.33
HACD3Q9P035 RPS15P9-201ENST00000494093 319 ntBASIC17.14■□□□□ 0.33
HACD3Q9P035 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC17.14■□□□□ 0.33
HACD3Q9P035 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.14■□□□□ 0.33
HACD3Q9P035 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC17.14■□□□□ 0.33
HACD3Q9P035 AL356488.2-201ENST00000602755 427 ntBASIC17.14■□□□□ 0.33
HACD3Q9P035 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC17.14■□□□□ 0.33
HACD3Q9P035 PRKN-208ENST00000610470 531 ntTSL 2 BASIC17.14■□□□□ 0.33
HACD3Q9P035 PRKN-209ENST00000612485 225 ntTSL 5 BASIC17.14■□□□□ 0.33
HACD3Q9P035 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
HACD3Q9P035 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC17.14■□□□□ 0.33
HACD3Q9P035 AC148477.8-201ENST00000624298 468 ntBASIC17.14■□□□□ 0.33
HACD3Q9P035 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC17.14■□□□□ 0.33
HACD3Q9P035 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
HACD3Q9P035 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HACD3Q9P035 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC17.14■□□□□ 0.33
HACD3Q9P035 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HACD3Q9P035 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HACD3Q9P035 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HACD3Q9P035 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
HACD3Q9P035 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HACD3Q9P035 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HACD3Q9P035 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC17.14■□□□□ 0.33
HACD3Q9P035 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HACD3Q9P035 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HACD3Q9P035 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.14■□□□□ 0.33
HACD3Q9P035 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC17.14■□□□□ 0.33
HACD3Q9P035 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HACD3Q9P035 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
HACD3Q9P035 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.13■□□□□ 0.33
HACD3Q9P035 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
HACD3Q9P035 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC17.13■□□□□ 0.33
HACD3Q9P035 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC17.13■□□□□ 0.33
HACD3Q9P035 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HACD3Q9P035 AC060834.1-201ENST00000443027 2032 ntBASIC17.13■□□□□ 0.33
HACD3Q9P035 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HACD3Q9P035 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.13■□□□□ 0.33
HACD3Q9P035 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HACD3Q9P035 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC17.13■□□□□ 0.33
HACD3Q9P035 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HACD3Q9P035 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC17.13■□□□□ 0.33
HACD3Q9P035 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
HACD3Q9P035 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC17.13■□□□□ 0.33
HACD3Q9P035 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
HACD3Q9P035 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC17.13■□□□□ 0.33
HACD3Q9P035 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.13■□□□□ 0.33
HACD3Q9P035 AP001005.1-201ENST00000571755 1248 ntBASIC17.13■□□□□ 0.33
HACD3Q9P035 AC005593.1-201ENST00000624894 515 ntBASIC17.13■□□□□ 0.33
HACD3Q9P035 ABBA01031661.1-201ENST00000634362 1253 ntBASIC17.13■□□□□ 0.33
HACD3Q9P035 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC17.13■□□□□ 0.33
HACD3Q9P035 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
HACD3Q9P035 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
HACD3Q9P035 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HACD3Q9P035 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
HACD3Q9P035 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HACD3Q9P035 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
HACD3Q9P035 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
HACD3Q9P035 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC17.13■□□□□ 0.33
HACD3Q9P035 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HACD3Q9P035 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC17.13■□□□□ 0.33
HACD3Q9P035 PI4KAP1-204ENST00000612579 1703 ntBASIC17.13■□□□□ 0.33
HACD3Q9P035 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.13■□□□□ 0.33
HACD3Q9P035 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC17.13■□□□□ 0.33
HACD3Q9P035 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
HACD3Q9P035 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HACD3Q9P035 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HACD3Q9P035 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC17.12■□□□□ 0.33
HACD3Q9P035 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.12■□□□□ 0.33
HACD3Q9P035 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
HACD3Q9P035 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC17.12■□□□□ 0.33
HACD3Q9P035 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC17.12■□□□□ 0.33
HACD3Q9P035 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms