Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
UPF2Q9HAU5 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
UPF2Q9HAU5 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
UPF2Q9HAU5 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
UPF2Q9HAU5 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
UPF2Q9HAU5 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC20.82■□□□□ 0.92
UPF2Q9HAU5 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
UPF2Q9HAU5 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
UPF2Q9HAU5 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
UPF2Q9HAU5 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
UPF2Q9HAU5 BX664615.1-201ENST00000443558 458 ntBASIC20.82■□□□□ 0.92
UPF2Q9HAU5 YBX1P2-201ENST00000489612 999 ntBASIC20.82■□□□□ 0.92
UPF2Q9HAU5 AC010203.1-204ENST00000548782 407 ntBASIC20.82■□□□□ 0.92
UPF2Q9HAU5 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
UPF2Q9HAU5 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC20.82■□□□□ 0.92
UPF2Q9HAU5 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC20.82■□□□□ 0.92
UPF2Q9HAU5 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
UPF2Q9HAU5 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC20.82■□□□□ 0.92
UPF2Q9HAU5 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
UPF2Q9HAU5 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
UPF2Q9HAU5 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
UPF2Q9HAU5 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
UPF2Q9HAU5 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
UPF2Q9HAU5 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
UPF2Q9HAU5 AL353593.2-201ENST00000602529 1483 ntBASIC20.81■□□□□ 0.92
UPF2Q9HAU5 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
UPF2Q9HAU5 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
UPF2Q9HAU5 UBC-206ENST00000538617 1303 ntTSL 5 BASIC20.81■□□□□ 0.92
UPF2Q9HAU5 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
UPF2Q9HAU5 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
UPF2Q9HAU5 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
UPF2Q9HAU5 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC20.81■□□□□ 0.92
UPF2Q9HAU5 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC20.81■□□□□ 0.92
UPF2Q9HAU5 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC20.81■□□□□ 0.92
UPF2Q9HAU5 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
UPF2Q9HAU5 ALOX12P2-203ENST00000570921 1945 ntBASIC20.81■□□□□ 0.92
UPF2Q9HAU5 AC003669.1-201ENST00000334569 611 ntBASIC20.81■□□□□ 0.92
UPF2Q9HAU5 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
UPF2Q9HAU5 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
UPF2Q9HAU5 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC20.81■□□□□ 0.92
UPF2Q9HAU5 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC20.81■□□□□ 0.92
UPF2Q9HAU5 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC20.81■□□□□ 0.92
UPF2Q9HAU5 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC20.81■□□□□ 0.92
UPF2Q9HAU5 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
UPF2Q9HAU5 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC20.81■□□□□ 0.92
UPF2Q9HAU5 RNF126P1-202ENST00000569893 925 ntBASIC20.81■□□□□ 0.92
UPF2Q9HAU5 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
UPF2Q9HAU5 AC139887.4-201ENST00000607877 719 ntBASIC20.81■□□□□ 0.92
UPF2Q9HAU5 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC20.81■□□□□ 0.92
UPF2Q9HAU5 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC20.81■□□□□ 0.92
UPF2Q9HAU5 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC20.81■□□□□ 0.92
UPF2Q9HAU5 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
UPF2Q9HAU5 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
UPF2Q9HAU5 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC20.81■□□□□ 0.92
UPF2Q9HAU5 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
UPF2Q9HAU5 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
UPF2Q9HAU5 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC20.81■□□□□ 0.92
UPF2Q9HAU5 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
UPF2Q9HAU5 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
UPF2Q9HAU5 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC20.8■□□□□ 0.92
UPF2Q9HAU5 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
UPF2Q9HAU5 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
UPF2Q9HAU5 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
UPF2Q9HAU5 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
UPF2Q9HAU5 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
UPF2Q9HAU5 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
UPF2Q9HAU5 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
UPF2Q9HAU5 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
UPF2Q9HAU5 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
UPF2Q9HAU5 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC20.8■□□□□ 0.92
UPF2Q9HAU5 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
UPF2Q9HAU5 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
UPF2Q9HAU5 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
UPF2Q9HAU5 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
UPF2Q9HAU5 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
UPF2Q9HAU5 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
UPF2Q9HAU5 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
UPF2Q9HAU5 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
UPF2Q9HAU5 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC20.8■□□□□ 0.92
UPF2Q9HAU5 HOMER2P1-201ENST00000455653 964 ntBASIC20.8■□□□□ 0.92
UPF2Q9HAU5 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC20.8■□□□□ 0.92
UPF2Q9HAU5 VENTXP5-201ENST00000523979 775 ntBASIC20.8■□□□□ 0.92
UPF2Q9HAU5 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
UPF2Q9HAU5 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC20.8■□□□□ 0.92
UPF2Q9HAU5 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
UPF2Q9HAU5 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC20.8■□□□□ 0.92
UPF2Q9HAU5 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC20.8■□□□□ 0.92
UPF2Q9HAU5 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
UPF2Q9HAU5 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC20.8■□□□□ 0.92
UPF2Q9HAU5 AC073912.3-201ENST00000624414 853 ntBASIC20.8■□□□□ 0.92
UPF2Q9HAU5 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC20.8■□□□□ 0.92
UPF2Q9HAU5 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
UPF2Q9HAU5 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
UPF2Q9HAU5 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
UPF2Q9HAU5 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC20.8■□□□□ 0.92
UPF2Q9HAU5 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC20.8■□□□□ 0.92
UPF2Q9HAU5 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
UPF2Q9HAU5 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC20.8■□□□□ 0.92
UPF2Q9HAU5 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
UPF2Q9HAU5 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms