Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC16.82■□□□□ 0.28
COL25A1Q9BXS0 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC16.82■□□□□ 0.28
COL25A1Q9BXS0 FAM32A-204ENST00000588367 798 ntTSL 2 BASIC16.82■□□□□ 0.28
COL25A1Q9BXS0 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
COL25A1Q9BXS0 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC16.82■□□□□ 0.28
COL25A1Q9BXS0 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC16.82■□□□□ 0.28
COL25A1Q9BXS0 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
COL25A1Q9BXS0 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
COL25A1Q9BXS0 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
COL25A1Q9BXS0 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
COL25A1Q9BXS0 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
COL25A1Q9BXS0 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
COL25A1Q9BXS0 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC16.82■□□□□ 0.28
COL25A1Q9BXS0 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC16.82■□□□□ 0.28
COL25A1Q9BXS0 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
COL25A1Q9BXS0 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
COL25A1Q9BXS0 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC16.81■□□□□ 0.28
COL25A1Q9BXS0 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
COL25A1Q9BXS0 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
COL25A1Q9BXS0 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC16.81■□□□□ 0.28
COL25A1Q9BXS0 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
COL25A1Q9BXS0 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
COL25A1Q9BXS0 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
COL25A1Q9BXS0 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
COL25A1Q9BXS0 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
COL25A1Q9BXS0 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC16.81■□□□□ 0.28
COL25A1Q9BXS0 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC16.81■□□□□ 0.28
COL25A1Q9BXS0 SUPT4H1P2-201ENST00000501248 353 ntBASIC16.81■□□□□ 0.28
COL25A1Q9BXS0 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
COL25A1Q9BXS0 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
COL25A1Q9BXS0 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC16.81■□□□□ 0.28
COL25A1Q9BXS0 MIR4741-201ENST00000579822 90 ntBASIC16.81■□□□□ 0.28
COL25A1Q9BXS0 AC100778.2-201ENST00000580150 483 ntTSL 5 BASIC16.81■□□□□ 0.28
COL25A1Q9BXS0 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC16.81■□□□□ 0.28
COL25A1Q9BXS0 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
COL25A1Q9BXS0 AC021097.1-201ENST00000607902 574 ntBASIC16.81■□□□□ 0.28
COL25A1Q9BXS0 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC16.81■□□□□ 0.28
COL25A1Q9BXS0 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
COL25A1Q9BXS0 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
COL25A1Q9BXS0 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
COL25A1Q9BXS0 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
COL25A1Q9BXS0 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC16.8■□□□□ 0.28
COL25A1Q9BXS0 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.8■□□□□ 0.28
COL25A1Q9BXS0 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
COL25A1Q9BXS0 HNRNPA1P48-201ENST00000562726 1377 ntBASIC16.8■□□□□ 0.28
COL25A1Q9BXS0 PHGDH-209ENST00000641074 1780 ntBASIC16.8■□□□□ 0.28
COL25A1Q9BXS0 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
COL25A1Q9BXS0 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
COL25A1Q9BXS0 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
COL25A1Q9BXS0 AZGP1P1-201ENST00000411909 902 ntBASIC16.8■□□□□ 0.28
COL25A1Q9BXS0 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC16.8■□□□□ 0.28
COL25A1Q9BXS0 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC16.8■□□□□ 0.28
COL25A1Q9BXS0 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC16.8■□□□□ 0.28
COL25A1Q9BXS0 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC16.8■□□□□ 0.28
COL25A1Q9BXS0 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC16.8■□□□□ 0.28
COL25A1Q9BXS0 AL359711.2-201ENST00000563105 872 ntBASIC16.8■□□□□ 0.28
COL25A1Q9BXS0 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC16.8■□□□□ 0.28
COL25A1Q9BXS0 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
COL25A1Q9BXS0 AL049840.4-201ENST00000602422 811 ntBASIC16.8■□□□□ 0.28
COL25A1Q9BXS0 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC16.8■□□□□ 0.28
COL25A1Q9BXS0 AC073352.2-201ENST00000609385 439 ntBASIC16.8■□□□□ 0.28
COL25A1Q9BXS0 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
COL25A1Q9BXS0 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC16.8■□□□□ 0.28
COL25A1Q9BXS0 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
COL25A1Q9BXS0 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
COL25A1Q9BXS0 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC16.8■□□□□ 0.28
COL25A1Q9BXS0 GOLGA2P9-201ENST00000596977 1937 ntBASIC16.8■□□□□ 0.28
COL25A1Q9BXS0 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
COL25A1Q9BXS0 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
COL25A1Q9BXS0 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
COL25A1Q9BXS0 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
COL25A1Q9BXS0 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
COL25A1Q9BXS0 LINC00896-202ENST00000609602 2128 ntBASIC16.79■□□□□ 0.28
COL25A1Q9BXS0 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
COL25A1Q9BXS0 AC112907.3-201ENST00000577781 2400 ntBASIC16.79■□□□□ 0.28
COL25A1Q9BXS0 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
COL25A1Q9BXS0 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
COL25A1Q9BXS0 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
COL25A1Q9BXS0 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
COL25A1Q9BXS0 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
COL25A1Q9BXS0 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC16.79■□□□□ 0.28
COL25A1Q9BXS0 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC16.79■□□□□ 0.28
COL25A1Q9BXS0 AC097065.1-201ENST00000425737 517 ntBASIC16.79■□□□□ 0.28
COL25A1Q9BXS0 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
COL25A1Q9BXS0 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC16.79■□□□□ 0.28
COL25A1Q9BXS0 MTX1P1-201ENST00000440904 838 ntBASIC16.79■□□□□ 0.28
COL25A1Q9BXS0 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC16.79■□□□□ 0.28
COL25A1Q9BXS0 AP001350.2-201ENST00000625104 1094 ntBASIC16.79■□□□□ 0.28
COL25A1Q9BXS0 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC16.79■□□□□ 0.28
COL25A1Q9BXS0 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
COL25A1Q9BXS0 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC16.79■□□□□ 0.28
COL25A1Q9BXS0 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
COL25A1Q9BXS0 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
COL25A1Q9BXS0 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC16.78■□□□□ 0.28
COL25A1Q9BXS0 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
COL25A1Q9BXS0 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC16.78■□□□□ 0.28
COL25A1Q9BXS0 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
COL25A1Q9BXS0 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
COL25A1Q9BXS0 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
COL25A1Q9BXS0 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms