Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NPAS2Q99743 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NPAS2Q99743 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NPAS2Q99743 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
NPAS2Q99743 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NPAS2Q99743 AC009078.2-202ENST00000463353 338 ntBASIC16.62■□□□□ 0.25
NPAS2Q99743 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC16.62■□□□□ 0.25
NPAS2Q99743 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC16.62■□□□□ 0.25
NPAS2Q99743 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC16.62■□□□□ 0.25
NPAS2Q99743 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC16.62■□□□□ 0.25
NPAS2Q99743 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NPAS2Q99743 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NPAS2Q99743 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NPAS2Q99743 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NPAS2Q99743 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
NPAS2Q99743 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
NPAS2Q99743 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
NPAS2Q99743 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NPAS2Q99743 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NPAS2Q99743 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.62■□□□□ 0.25
NPAS2Q99743 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NPAS2Q99743 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NPAS2Q99743 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NPAS2Q99743 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NPAS2Q99743 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NPAS2Q99743 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.61■□□□□ 0.25
NPAS2Q99743 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
NPAS2Q99743 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NPAS2Q99743 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.61■□□□□ 0.25
NPAS2Q99743 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NPAS2Q99743 AL596257.1-201ENST00000641463 2694 ntBASIC16.61■□□□□ 0.25
NPAS2Q99743 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
NPAS2Q99743 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.61■□□□□ 0.25
NPAS2Q99743 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NPAS2Q99743 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NPAS2Q99743 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
NPAS2Q99743 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
NPAS2Q99743 POM121L3P-201ENST00000419331 1163 ntBASIC16.61■□□□□ 0.25
NPAS2Q99743 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC16.61■□□□□ 0.25
NPAS2Q99743 AC096582.2-201ENST00000510860 516 ntBASIC16.61■□□□□ 0.25
NPAS2Q99743 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.61■□□□□ 0.25
NPAS2Q99743 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
NPAS2Q99743 AC124947.2-201ENST00000547118 1133 ntBASIC16.61■□□□□ 0.25
NPAS2Q99743 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC16.61■□□□□ 0.25
NPAS2Q99743 KLK8-205ENST00000593490 267 ntTSL 3 BASIC16.61■□□□□ 0.25
NPAS2Q99743 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.61■□□□□ 0.25
NPAS2Q99743 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NPAS2Q99743 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC16.61■□□□□ 0.25
NPAS2Q99743 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NPAS2Q99743 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NPAS2Q99743 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NPAS2Q99743 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NPAS2Q99743 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NPAS2Q99743 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NPAS2Q99743 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.61■□□□□ 0.25
NPAS2Q99743 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.61■□□□□ 0.25
NPAS2Q99743 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
NPAS2Q99743 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
NPAS2Q99743 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC16.6■□□□□ 0.25
NPAS2Q99743 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NPAS2Q99743 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
NPAS2Q99743 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
NPAS2Q99743 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NPAS2Q99743 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
NPAS2Q99743 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NPAS2Q99743 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
NPAS2Q99743 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
NPAS2Q99743 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.6■□□□□ 0.25
NPAS2Q99743 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NPAS2Q99743 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NPAS2Q99743 RCN1P2-201ENST00000398357 915 ntBASIC16.6■□□□□ 0.25
NPAS2Q99743 AC096633.1-201ENST00000422446 749 ntBASIC16.6■□□□□ 0.25
NPAS2Q99743 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC16.6■□□□□ 0.25
NPAS2Q99743 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NPAS2Q99743 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.6■□□□□ 0.25
NPAS2Q99743 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NPAS2Q99743 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NPAS2Q99743 MIR5100-201ENST00000579544 119 ntBASIC16.6■□□□□ 0.25
NPAS2Q99743 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC16.6■□□□□ 0.25
NPAS2Q99743 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
NPAS2Q99743 AL138831.2-201ENST00000606564 490 ntBASIC16.6■□□□□ 0.25
NPAS2Q99743 AC114341.1-201ENST00000618070 349 ntBASIC16.6■□□□□ 0.25
NPAS2Q99743 REXO1L6P-202ENST00000619970 1078 ntBASIC16.6■□□□□ 0.25
NPAS2Q99743 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NPAS2Q99743 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NPAS2Q99743 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
NPAS2Q99743 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NPAS2Q99743 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NPAS2Q99743 KRT8P10-201ENST00000450021 1447 ntBASIC16.6■□□□□ 0.25
NPAS2Q99743 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.6■□□□□ 0.25
NPAS2Q99743 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NPAS2Q99743 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NPAS2Q99743 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NPAS2Q99743 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.6■□□□□ 0.25
NPAS2Q99743 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NPAS2Q99743 AC010460.3-201ENST00000511359 1579 ntBASIC16.6■□□□□ 0.25
NPAS2Q99743 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NPAS2Q99743 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NPAS2Q99743 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.59■□□□□ 0.25
NPAS2Q99743 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms