Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PKP4Q99569 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.47■□□□□ 0.23
PKP4Q99569 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC16.47■□□□□ 0.23
PKP4Q99569 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC16.47■□□□□ 0.23
PKP4Q99569 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.47■□□□□ 0.23
PKP4Q99569 AGGF1P2-201ENST00000426656 2106 ntBASIC16.47■□□□□ 0.23
PKP4Q99569 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PKP4Q99569 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC16.47■□□□□ 0.23
PKP4Q99569 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PKP4Q99569 AC107918.2-201ENST00000530817 355 ntBASIC16.47■□□□□ 0.23
PKP4Q99569 CD63-204ENST00000546939 779 ntTSL 3 BASIC16.47■□□□□ 0.23
PKP4Q99569 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
PKP4Q99569 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
PKP4Q99569 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC16.47■□□□□ 0.23
PKP4Q99569 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PKP4Q99569 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PKP4Q99569 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC16.47■□□□□ 0.23
PKP4Q99569 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PKP4Q99569 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
PKP4Q99569 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PKP4Q99569 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PKP4Q99569 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PKP4Q99569 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC16.47■□□□□ 0.23
PKP4Q99569 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PKP4Q99569 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
PKP4Q99569 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PKP4Q99569 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.47■□□□□ 0.23
PKP4Q99569 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC16.46■□□□□ 0.23
PKP4Q99569 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC16.46■□□□□ 0.23
PKP4Q99569 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PKP4Q99569 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PKP4Q99569 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.46■□□□□ 0.23
PKP4Q99569 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PKP4Q99569 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC16.46■□□□□ 0.23
PKP4Q99569 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC16.46■□□□□ 0.23
PKP4Q99569 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.46■□□□□ 0.23
PKP4Q99569 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PKP4Q99569 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
PKP4Q99569 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
PKP4Q99569 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.46■□□□□ 0.23
PKP4Q99569 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
PKP4Q99569 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
PKP4Q99569 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PKP4Q99569 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
PKP4Q99569 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
PKP4Q99569 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC16.46■□□□□ 0.23
PKP4Q99569 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC16.46■□□□□ 0.23
PKP4Q99569 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC16.46■□□□□ 0.23
PKP4Q99569 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC16.46■□□□□ 0.23
PKP4Q99569 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC16.46■□□□□ 0.23
PKP4Q99569 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC16.46■□□□□ 0.23
PKP4Q99569 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC16.46■□□□□ 0.23
PKP4Q99569 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC16.46■□□□□ 0.23
PKP4Q99569 MIR4751-201ENST00000578027 74 ntBASIC16.46■□□□□ 0.23
PKP4Q99569 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PKP4Q99569 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
PKP4Q99569 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC16.46■□□□□ 0.23
PKP4Q99569 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC16.46■□□□□ 0.23
PKP4Q99569 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC16.46■□□□□ 0.23
PKP4Q99569 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PKP4Q99569 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PKP4Q99569 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
PKP4Q99569 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC16.46■□□□□ 0.23
PKP4Q99569 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
PKP4Q99569 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PKP4Q99569 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
PKP4Q99569 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PKP4Q99569 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
PKP4Q99569 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
PKP4Q99569 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
PKP4Q99569 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
PKP4Q99569 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC16.45■□□□□ 0.22
PKP4Q99569 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC16.45■□□□□ 0.22
PKP4Q99569 IL9RP2-201ENST00000423948 1312 ntBASIC16.45■□□□□ 0.22
PKP4Q99569 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
PKP4Q99569 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PKP4Q99569 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC16.45■□□□□ 0.22
PKP4Q99569 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC16.45■□□□□ 0.22
PKP4Q99569 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PKP4Q99569 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.45■□□□□ 0.22
PKP4Q99569 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PKP4Q99569 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PKP4Q99569 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
PKP4Q99569 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PKP4Q99569 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PKP4Q99569 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
PKP4Q99569 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PKP4Q99569 AL590627.1-203ENST00000421194 1026 ntBASIC16.45■□□□□ 0.22
PKP4Q99569 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PKP4Q99569 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
PKP4Q99569 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16.45■□□□□ 0.22
PKP4Q99569 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC16.45■□□□□ 0.22
PKP4Q99569 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC16.45■□□□□ 0.22
PKP4Q99569 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC16.45■□□□□ 0.22
PKP4Q99569 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
PKP4Q99569 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PKP4Q99569 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC16.45■□□□□ 0.22
PKP4Q99569 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC16.45■□□□□ 0.22
PKP4Q99569 AL391256.1-201ENST00000443260 1855 ntBASIC16.45■□□□□ 0.22
PKP4Q99569 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms