Protein–RNA interactions for Protein: Q96LX7

CCDC17, Coiled-coil domain-containing protein 17, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC17Q96LX7 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC17Q96LX7 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC17Q96LX7 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC19.62■□□□□ 0.73
CCDC17Q96LX7 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC19.62■□□□□ 0.73
CCDC17Q96LX7 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC17Q96LX7 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC17Q96LX7 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC17Q96LX7 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CCDC17Q96LX7 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC17Q96LX7 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC17Q96LX7 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC17Q96LX7 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC17Q96LX7 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC19.62■□□□□ 0.73
CCDC17Q96LX7 RBPMS2P1-201ENST00000437762 623 ntBASIC19.62■□□□□ 0.73
CCDC17Q96LX7 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
CCDC17Q96LX7 FAM86GP-201ENST00000448322 971 ntBASIC19.62■□□□□ 0.73
CCDC17Q96LX7 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC19.62■□□□□ 0.73
CCDC17Q96LX7 AP002490.2-201ENST00000524791 560 ntBASIC19.62■□□□□ 0.73
CCDC17Q96LX7 AP000842.3-202ENST00000569238 1080 ntBASIC19.62■□□□□ 0.73
CCDC17Q96LX7 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC19.62■□□□□ 0.73
CCDC17Q96LX7 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC17Q96LX7 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC17Q96LX7 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
CCDC17Q96LX7 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC17Q96LX7 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
CCDC17Q96LX7 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC17Q96LX7 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC17Q96LX7 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC17Q96LX7 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC17Q96LX7 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
CCDC17Q96LX7 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC17Q96LX7 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC17Q96LX7 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC17Q96LX7 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
CCDC17Q96LX7 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC17Q96LX7 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC19.61■□□□□ 0.73
CCDC17Q96LX7 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC17Q96LX7 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC17Q96LX7 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC17Q96LX7 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC17Q96LX7 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC17Q96LX7 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC17Q96LX7 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC17Q96LX7 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC19.61■□□□□ 0.73
CCDC17Q96LX7 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC17Q96LX7 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC19.61■□□□□ 0.73
CCDC17Q96LX7 AC069262.1-201ENST00000539058 672 ntBASIC19.61■□□□□ 0.73
CCDC17Q96LX7 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC19.61■□□□□ 0.73
CCDC17Q96LX7 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC19.61■□□□□ 0.73
CCDC17Q96LX7 Z92544.3-201ENST00000624747 417 ntBASIC19.61■□□□□ 0.73
CCDC17Q96LX7 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC19.61■□□□□ 0.73
CCDC17Q96LX7 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC17Q96LX7 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC17Q96LX7 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC19.61■□□□□ 0.73
CCDC17Q96LX7 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC17Q96LX7 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
CCDC17Q96LX7 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC19.61■□□□□ 0.73
CCDC17Q96LX7 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
CCDC17Q96LX7 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC19.6■□□□□ 0.73
CCDC17Q96LX7 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
CCDC17Q96LX7 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC19.6■□□□□ 0.73
CCDC17Q96LX7 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC17Q96LX7 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC17Q96LX7 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC19.6■□□□□ 0.73
CCDC17Q96LX7 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC17Q96LX7 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CCDC17Q96LX7 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC17Q96LX7 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC17Q96LX7 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC17Q96LX7 MIR770-201ENST00000390219 98 ntBASIC19.6■□□□□ 0.73
CCDC17Q96LX7 CNN2P2-201ENST00000443536 909 ntBASIC19.6■□□□□ 0.73
CCDC17Q96LX7 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC19.6■□□□□ 0.73
CCDC17Q96LX7 CNN2P3-201ENST00000450201 906 ntBASIC19.6■□□□□ 0.73
CCDC17Q96LX7 SLC25A39P2-201ENST00000537614 270 ntBASIC19.6■□□□□ 0.73
CCDC17Q96LX7 VPS29-207ENST00000549970 818 ntTSL 3 BASIC19.6■□□□□ 0.73
CCDC17Q96LX7 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC17Q96LX7 AL136317.3-201ENST00000618497 906 ntBASIC19.6■□□□□ 0.73
CCDC17Q96LX7 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC19.6■□□□□ 0.73
CCDC17Q96LX7 AL139011.1-202ENST00000642063 584 ntBASIC19.6■□□□□ 0.73
CCDC17Q96LX7 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC17Q96LX7 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC19.6■□□□□ 0.73
CCDC17Q96LX7 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC17Q96LX7 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
CCDC17Q96LX7 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC17Q96LX7 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
CCDC17Q96LX7 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC19.6■□□□□ 0.73
CCDC17Q96LX7 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
CCDC17Q96LX7 KRT8P39-201ENST00000396270 1433 ntBASIC19.59■□□□□ 0.73
CCDC17Q96LX7 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC19.59■□□□□ 0.73
CCDC17Q96LX7 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC17Q96LX7 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC19.59■□□□□ 0.73
CCDC17Q96LX7 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC17Q96LX7 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC17Q96LX7 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
CCDC17Q96LX7 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC19.59■□□□□ 0.73
CCDC17Q96LX7 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC17Q96LX7 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC19.59■□□□□ 0.73
CCDC17Q96LX7 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
CCDC17Q96LX7 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC17Q96LX7 HLA-DRB6-201ENST00000411500 1235 ntBASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms