Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
ATP2A3Q93084 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ATP2A3Q93084 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
ATP2A3Q93084 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ATP2A3Q93084 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ATP2A3Q93084 PKD1P5-201ENST00000532415 10291 ntBASIC17.85■□□□□ 0.45
ATP2A3Q93084 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
ATP2A3Q93084 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ATP2A3Q93084 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
ATP2A3Q93084 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ATP2A3Q93084 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
ATP2A3Q93084 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.85■□□□□ 0.45
ATP2A3Q93084 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC17.85■□□□□ 0.45
ATP2A3Q93084 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC17.85■□□□□ 0.45
ATP2A3Q93084 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC17.85■□□□□ 0.45
ATP2A3Q93084 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC17.85■□□□□ 0.45
ATP2A3Q93084 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC17.85■□□□□ 0.45
ATP2A3Q93084 ALG1L5P-201ENST00000482043 771 ntBASIC17.85■□□□□ 0.45
ATP2A3Q93084 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
ATP2A3Q93084 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
ATP2A3Q93084 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
ATP2A3Q93084 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC17.85■□□□□ 0.45
ATP2A3Q93084 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
ATP2A3Q93084 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC17.85■□□□□ 0.45
ATP2A3Q93084 AC096734.2-201ENST00000562054 433 ntBASIC17.85■□□□□ 0.45
ATP2A3Q93084 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC17.85■□□□□ 0.45
ATP2A3Q93084 MIR4469-201ENST00000583919 79 ntBASIC17.85■□□□□ 0.45
ATP2A3Q93084 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
ATP2A3Q93084 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC17.85■□□□□ 0.45
ATP2A3Q93084 AL121761.2-201ENST00000598007 1648 ntBASIC17.85■□□□□ 0.45
ATP2A3Q93084 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC17.85■□□□□ 0.45
ATP2A3Q93084 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.85■□□□□ 0.45
ATP2A3Q93084 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ATP2A3Q93084 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
ATP2A3Q93084 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
ATP2A3Q93084 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ATP2A3Q93084 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
ATP2A3Q93084 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
ATP2A3Q93084 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.84■□□□□ 0.45
ATP2A3Q93084 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
ATP2A3Q93084 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ATP2A3Q93084 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
ATP2A3Q93084 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
ATP2A3Q93084 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
ATP2A3Q93084 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
ATP2A3Q93084 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
ATP2A3Q93084 LINC00304-203ENST00000565008 1864 ntBASIC17.84■□□□□ 0.45
ATP2A3Q93084 OVCH1-AS1-204ENST00000641955 5529 ntBASIC17.84■□□□□ 0.45
ATP2A3Q93084 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ATP2A3Q93084 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.84■□□□□ 0.45
ATP2A3Q93084 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.84■□□□□ 0.45
ATP2A3Q93084 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
ATP2A3Q93084 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ATP2A3Q93084 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ATP2A3Q93084 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC17.84■□□□□ 0.45
ATP2A3Q93084 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ATP2A3Q93084 CROCCP2-202ENST00000412962 2773 ntBASIC17.84■□□□□ 0.45
ATP2A3Q93084 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ATP2A3Q93084 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
ATP2A3Q93084 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
ATP2A3Q93084 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC17.84■□□□□ 0.45
ATP2A3Q93084 HTR5BP-201ENST00000430851 1154 ntBASIC17.84■□□□□ 0.45
ATP2A3Q93084 MKNK2P1-201ENST00000437526 628 ntBASIC17.84■□□□□ 0.45
ATP2A3Q93084 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ATP2A3Q93084 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC17.84■□□□□ 0.45
ATP2A3Q93084 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC17.84■□□□□ 0.45
ATP2A3Q93084 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC17.84■□□□□ 0.45
ATP2A3Q93084 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC17.84■□□□□ 0.45
ATP2A3Q93084 AC010507.1-201ENST00000633895 436 ntBASIC17.84■□□□□ 0.45
ATP2A3Q93084 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
ATP2A3Q93084 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
ATP2A3Q93084 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ATP2A3Q93084 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC17.84■□□□□ 0.45
ATP2A3Q93084 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
ATP2A3Q93084 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.84■□□□□ 0.45
ATP2A3Q93084 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ATP2A3Q93084 PI4KAP1-204ENST00000612579 1703 ntBASIC17.84■□□□□ 0.45
ATP2A3Q93084 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
ATP2A3Q93084 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
ATP2A3Q93084 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
ATP2A3Q93084 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
ATP2A3Q93084 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
ATP2A3Q93084 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
ATP2A3Q93084 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
ATP2A3Q93084 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
ATP2A3Q93084 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
ATP2A3Q93084 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
ATP2A3Q93084 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
ATP2A3Q93084 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ATP2A3Q93084 ENSA-206ENST00000361631 725 ntTSL 2 BASIC17.83■□□□□ 0.44
ATP2A3Q93084 PDPK2P-202ENST00000562415 1191 ntBASIC17.83■□□□□ 0.44
ATP2A3Q93084 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
ATP2A3Q93084 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC17.83■□□□□ 0.44
ATP2A3Q93084 AL596442.2-201ENST00000610240 980 ntBASIC17.83■□□□□ 0.44
ATP2A3Q93084 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ATP2A3Q93084 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ATP2A3Q93084 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
ATP2A3Q93084 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC17.83■□□□□ 0.44
ATP2A3Q93084 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
ATP2A3Q93084 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms