Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 AC134684.3-201ENST00000641758 218 ntBASIC18■□□□□ 0.47
DDX1Q92499 HTR7P1-202ENST00000624664 4411 ntBASIC18■□□□□ 0.47
DDX1Q92499 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC18■□□□□ 0.47
DDX1Q92499 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
DDX1Q92499 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
DDX1Q92499 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC18■□□□□ 0.47
DDX1Q92499 AP002414.3-201ENST00000589352 1468 ntBASIC18■□□□□ 0.47
DDX1Q92499 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC18■□□□□ 0.47
DDX1Q92499 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC17.99■□□□□ 0.47
DDX1Q92499 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC17.99■□□□□ 0.47
DDX1Q92499 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
DDX1Q92499 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
DDX1Q92499 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC17.99■□□□□ 0.47
DDX1Q92499 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
DDX1Q92499 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.99■□□□□ 0.47
DDX1Q92499 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
DDX1Q92499 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
DDX1Q92499 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
DDX1Q92499 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
DDX1Q92499 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC17.99■□□□□ 0.47
DDX1Q92499 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
DDX1Q92499 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.99■□□□□ 0.47
DDX1Q92499 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
DDX1Q92499 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
DDX1Q92499 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
DDX1Q92499 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC17.99■□□□□ 0.47
DDX1Q92499 CENPM-204ENST00000402420 688 ntTSL 5 BASIC17.99■□□□□ 0.47
DDX1Q92499 COA5-202ENST00000409997 557 ntTSL 4 BASIC17.99■□□□□ 0.47
DDX1Q92499 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC17.99■□□□□ 0.47
DDX1Q92499 FIS1-203ENST00000442303 631 ntTSL 3 BASIC17.99■□□□□ 0.47
DDX1Q92499 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC17.99■□□□□ 0.47
DDX1Q92499 KRT18P3-201ENST00000451602 1288 ntBASIC17.99■□□□□ 0.47
DDX1Q92499 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
DDX1Q92499 AC092364.2-202ENST00000597012 1073 ntBASIC17.99■□□□□ 0.47
DDX1Q92499 AC008667.4-201ENST00000607370 168 ntBASIC17.99■□□□□ 0.47
DDX1Q92499 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
DDX1Q92499 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
DDX1Q92499 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC17.99■□□□□ 0.47
DDX1Q92499 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC17.99■□□□□ 0.47
DDX1Q92499 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.99■□□□□ 0.47
DDX1Q92499 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
DDX1Q92499 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
DDX1Q92499 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
DDX1Q92499 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
DDX1Q92499 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.99■□□□□ 0.47
DDX1Q92499 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
DDX1Q92499 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
DDX1Q92499 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
DDX1Q92499 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
DDX1Q92499 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
DDX1Q92499 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
DDX1Q92499 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
DDX1Q92499 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
DDX1Q92499 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
DDX1Q92499 GCK-202ENST00000345378 2421 ntTSL 2 BASIC17.98■□□□□ 0.47
DDX1Q92499 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
DDX1Q92499 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
DDX1Q92499 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
DDX1Q92499 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
DDX1Q92499 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC17.98■□□□□ 0.47
DDX1Q92499 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC17.98■□□□□ 0.47
DDX1Q92499 LBH-203ENST00000404397 543 ntTSL 4 BASIC17.98■□□□□ 0.47
DDX1Q92499 LBH-204ENST00000406087 559 ntTSL 4 BASIC17.98■□□□□ 0.47
DDX1Q92499 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC17.98■□□□□ 0.47
DDX1Q92499 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC17.98■□□□□ 0.47
DDX1Q92499 IGHV3-65-201ENST00000523210 341 ntBASIC17.98■□□□□ 0.47
DDX1Q92499 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC17.98■□□□□ 0.47
DDX1Q92499 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC17.98■□□□□ 0.47
DDX1Q92499 AC105339.3-201ENST00000560043 636 ntBASIC17.98■□□□□ 0.47
DDX1Q92499 MPDU1-223ENST00000582151 728 ntBASIC17.98■□□□□ 0.47
DDX1Q92499 AL139011.1-202ENST00000642063 584 ntBASIC17.98■□□□□ 0.47
DDX1Q92499 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
DDX1Q92499 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC17.98■□□□□ 0.47
DDX1Q92499 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
DDX1Q92499 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
DDX1Q92499 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
DDX1Q92499 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
DDX1Q92499 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
DDX1Q92499 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
DDX1Q92499 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
DDX1Q92499 AC006538.1-201ENST00000567905 1585 ntBASIC17.97■□□□□ 0.47
DDX1Q92499 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
DDX1Q92499 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
DDX1Q92499 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
DDX1Q92499 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
DDX1Q92499 IGHV3-22-201ENST00000520721 359 ntBASIC17.97■□□□□ 0.47
DDX1Q92499 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC17.97■□□□□ 0.47
DDX1Q92499 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC17.97■□□□□ 0.47
DDX1Q92499 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
DDX1Q92499 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC17.97■□□□□ 0.47
DDX1Q92499 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
DDX1Q92499 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
DDX1Q92499 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
DDX1Q92499 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
DDX1Q92499 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
DDX1Q92499 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
DDX1Q92499 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC17.97■□□□□ 0.47
DDX1Q92499 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
DDX1Q92499 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
DDX1Q92499 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms