Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
PTCD2Q8WV60 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
PTCD2Q8WV60 AL136370.1-201ENST00000608166 691 ntBASIC17.18■□□□□ 0.34
PTCD2Q8WV60 AC108359.1-201ENST00000616451 1211 ntBASIC17.18■□□□□ 0.34
PTCD2Q8WV60 AL589182.2-201ENST00000619332 1049 ntBASIC17.18■□□□□ 0.34
PTCD2Q8WV60 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PTCD2Q8WV60 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.18■□□□□ 0.34
PTCD2Q8WV60 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.18■□□□□ 0.34
PTCD2Q8WV60 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.18■□□□□ 0.34
PTCD2Q8WV60 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC17.18■□□□□ 0.34
PTCD2Q8WV60 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PTCD2Q8WV60 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
PTCD2Q8WV60 AL590787.1-201ENST00000568856 1315 ntBASIC17.18■□□□□ 0.34
PTCD2Q8WV60 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
PTCD2Q8WV60 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.18■□□□□ 0.34
PTCD2Q8WV60 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PTCD2Q8WV60 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
PTCD2Q8WV60 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PTCD2Q8WV60 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
PTCD2Q8WV60 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.17■□□□□ 0.34
PTCD2Q8WV60 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
PTCD2Q8WV60 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
PTCD2Q8WV60 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
PTCD2Q8WV60 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PTCD2Q8WV60 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.17■□□□□ 0.34
PTCD2Q8WV60 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
PTCD2Q8WV60 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PTCD2Q8WV60 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
PTCD2Q8WV60 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
PTCD2Q8WV60 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PTCD2Q8WV60 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
PTCD2Q8WV60 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC17.17■□□□□ 0.34
PTCD2Q8WV60 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PTCD2Q8WV60 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
PTCD2Q8WV60 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PTCD2Q8WV60 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PTCD2Q8WV60 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PTCD2Q8WV60 CD63-204ENST00000546939 779 ntTSL 3 BASIC17.17■□□□□ 0.34
PTCD2Q8WV60 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC17.17■□□□□ 0.34
PTCD2Q8WV60 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC17.17■□□□□ 0.34
PTCD2Q8WV60 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC17.17■□□□□ 0.34
PTCD2Q8WV60 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
PTCD2Q8WV60 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC17.17■□□□□ 0.34
PTCD2Q8WV60 AC092723.2-201ENST00000624955 793 ntBASIC17.17■□□□□ 0.34
PTCD2Q8WV60 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
PTCD2Q8WV60 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PTCD2Q8WV60 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.17■□□□□ 0.34
PTCD2Q8WV60 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
PTCD2Q8WV60 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
PTCD2Q8WV60 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
PTCD2Q8WV60 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
PTCD2Q8WV60 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PTCD2Q8WV60 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC17.17■□□□□ 0.34
PTCD2Q8WV60 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
PTCD2Q8WV60 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PTCD2Q8WV60 FLJ38576-201ENST00000623820 2459 ntBASIC17.16■□□□□ 0.34
PTCD2Q8WV60 AL118508.1-201ENST00000613502 2345 ntBASIC17.16■□□□□ 0.34
PTCD2Q8WV60 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PTCD2Q8WV60 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
PTCD2Q8WV60 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PTCD2Q8WV60 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PTCD2Q8WV60 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
PTCD2Q8WV60 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.16■□□□□ 0.34
PTCD2Q8WV60 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PTCD2Q8WV60 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC17.16■□□□□ 0.34
PTCD2Q8WV60 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
PTCD2Q8WV60 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PTCD2Q8WV60 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PTCD2Q8WV60 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC17.16■□□□□ 0.34
PTCD2Q8WV60 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.16■□□□□ 0.34
PTCD2Q8WV60 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.16■□□□□ 0.34
PTCD2Q8WV60 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PTCD2Q8WV60 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC17.16■□□□□ 0.34
PTCD2Q8WV60 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PTCD2Q8WV60 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PTCD2Q8WV60 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.16■□□□□ 0.34
PTCD2Q8WV60 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC17.16■□□□□ 0.34
PTCD2Q8WV60 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC17.16■□□□□ 0.34
PTCD2Q8WV60 POLD2P1-201ENST00000511220 997 ntBASIC17.16■□□□□ 0.34
PTCD2Q8WV60 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PTCD2Q8WV60 UNC93B6-202ENST00000528242 690 ntBASIC17.16■□□□□ 0.34
PTCD2Q8WV60 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC17.16■□□□□ 0.34
PTCD2Q8WV60 RPS29-206ENST00000557111 488 ntTSL 2 BASIC17.16■□□□□ 0.34
PTCD2Q8WV60 AC034105.1-201ENST00000563488 319 ntBASIC17.16■□□□□ 0.34
PTCD2Q8WV60 AL356488.2-201ENST00000602755 427 ntBASIC17.16■□□□□ 0.34
PTCD2Q8WV60 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC17.16■□□□□ 0.34
PTCD2Q8WV60 AC004706.3-202ENST00000621574 984 ntBASIC17.16■□□□□ 0.34
PTCD2Q8WV60 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC17.16■□□□□ 0.34
PTCD2Q8WV60 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PTCD2Q8WV60 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.16■□□□□ 0.34
PTCD2Q8WV60 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PTCD2Q8WV60 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PTCD2Q8WV60 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PTCD2Q8WV60 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PTCD2Q8WV60 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PTCD2Q8WV60 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
PTCD2Q8WV60 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PTCD2Q8WV60 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
PTCD2Q8WV60 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PTCD2Q8WV60 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms