Protein–RNA interactions for Protein: Q8WU68

U2AF1L4, Splicing factor U2AF 26 kDa subunit, humanhuman

Known RBP Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1L4Q8WU68 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
U2AF1L4Q8WU68 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC19.34■□□□□ 0.69
U2AF1L4Q8WU68 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC19.34■□□□□ 0.69
U2AF1L4Q8WU68 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
U2AF1L4Q8WU68 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
U2AF1L4Q8WU68 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
U2AF1L4Q8WU68 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
U2AF1L4Q8WU68 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
U2AF1L4Q8WU68 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC19.34■□□□□ 0.69
U2AF1L4Q8WU68 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
U2AF1L4Q8WU68 ATP5G2P4-201ENST00000442175 420 ntBASIC19.34■□□□□ 0.69
U2AF1L4Q8WU68 AC097493.3-201ENST00000509725 367 ntBASIC19.34■□□□□ 0.69
U2AF1L4Q8WU68 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC19.34■□□□□ 0.69
U2AF1L4Q8WU68 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
U2AF1L4Q8WU68 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
U2AF1L4Q8WU68 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
U2AF1L4Q8WU68 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
U2AF1L4Q8WU68 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
U2AF1L4Q8WU68 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
U2AF1L4Q8WU68 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
U2AF1L4Q8WU68 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
U2AF1L4Q8WU68 CYP51A1P2-201ENST00000419457 1499 ntBASIC19.34■□□□□ 0.69
U2AF1L4Q8WU68 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
U2AF1L4Q8WU68 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
U2AF1L4Q8WU68 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC19.34■□□□□ 0.69
U2AF1L4Q8WU68 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC19.34■□□□□ 0.69
U2AF1L4Q8WU68 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC19.34■□□□□ 0.69
U2AF1L4Q8WU68 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
U2AF1L4Q8WU68 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
U2AF1L4Q8WU68 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC19.33■□□□□ 0.69
U2AF1L4Q8WU68 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC19.33■□□□□ 0.69
U2AF1L4Q8WU68 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
U2AF1L4Q8WU68 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
U2AF1L4Q8WU68 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
U2AF1L4Q8WU68 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
U2AF1L4Q8WU68 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
U2AF1L4Q8WU68 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
U2AF1L4Q8WU68 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
U2AF1L4Q8WU68 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
U2AF1L4Q8WU68 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC19.33■□□□□ 0.68
U2AF1L4Q8WU68 PIN1P1-201ENST00000412108 996 ntBASIC19.33■□□□□ 0.68
U2AF1L4Q8WU68 SPDYE7P-202ENST00000420373 878 ntBASIC19.33■□□□□ 0.68
U2AF1L4Q8WU68 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
U2AF1L4Q8WU68 SPCS2P4-201ENST00000436160 681 ntBASIC19.33■□□□□ 0.68
U2AF1L4Q8WU68 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
U2AF1L4Q8WU68 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
U2AF1L4Q8WU68 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC19.33■□□□□ 0.68
U2AF1L4Q8WU68 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC19.33■□□□□ 0.68
U2AF1L4Q8WU68 RARRES2P8-201ENST00000566335 367 ntBASIC19.33■□□□□ 0.68
U2AF1L4Q8WU68 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC19.33■□□□□ 0.68
U2AF1L4Q8WU68 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
U2AF1L4Q8WU68 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
U2AF1L4Q8WU68 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
U2AF1L4Q8WU68 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC19.33■□□□□ 0.68
U2AF1L4Q8WU68 AC100803.2-201ENST00000562459 1963 ntBASIC19.33■□□□□ 0.68
U2AF1L4Q8WU68 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
U2AF1L4Q8WU68 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
U2AF1L4Q8WU68 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
U2AF1L4Q8WU68 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
U2AF1L4Q8WU68 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
U2AF1L4Q8WU68 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC19.32■□□□□ 0.68
U2AF1L4Q8WU68 AKAP8P1-201ENST00000434743 1349 ntBASIC19.32■□□□□ 0.68
U2AF1L4Q8WU68 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
U2AF1L4Q8WU68 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
U2AF1L4Q8WU68 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
U2AF1L4Q8WU68 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC19.32■□□□□ 0.68
U2AF1L4Q8WU68 ACTG1P4-201ENST00000425123 1122 ntBASIC19.32■□□□□ 0.68
U2AF1L4Q8WU68 SPDYE14P-201ENST00000442619 822 ntBASIC19.32■□□□□ 0.68
U2AF1L4Q8WU68 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC19.32■□□□□ 0.68
U2AF1L4Q8WU68 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC19.32■□□□□ 0.68
U2AF1L4Q8WU68 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC19.32■□□□□ 0.68
U2AF1L4Q8WU68 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC19.32■□□□□ 0.68
U2AF1L4Q8WU68 AC069120.2-201ENST00000524091 540 ntBASIC19.32■□□□□ 0.68
U2AF1L4Q8WU68 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
U2AF1L4Q8WU68 COQ9-214ENST00000567933 882 ntTSL 3 BASIC19.32■□□□□ 0.68
U2AF1L4Q8WU68 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC19.32■□□□□ 0.68
U2AF1L4Q8WU68 SRP9-204ENST00000619790 377 ntTSL 2 BASIC19.32■□□□□ 0.68
U2AF1L4Q8WU68 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
U2AF1L4Q8WU68 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
U2AF1L4Q8WU68 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
U2AF1L4Q8WU68 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC19.32■□□□□ 0.68
U2AF1L4Q8WU68 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
U2AF1L4Q8WU68 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
U2AF1L4Q8WU68 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC19.32■□□□□ 0.68
U2AF1L4Q8WU68 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
U2AF1L4Q8WU68 WAC-202ENST00000347934 2839 ntTSL 5 BASIC19.32■□□□□ 0.68
U2AF1L4Q8WU68 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
U2AF1L4Q8WU68 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
U2AF1L4Q8WU68 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
U2AF1L4Q8WU68 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
U2AF1L4Q8WU68 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC19.31■□□□□ 0.68
U2AF1L4Q8WU68 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC19.31■□□□□ 0.68
U2AF1L4Q8WU68 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
U2AF1L4Q8WU68 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
U2AF1L4Q8WU68 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC19.31■□□□□ 0.68
U2AF1L4Q8WU68 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
U2AF1L4Q8WU68 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
U2AF1L4Q8WU68 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
U2AF1L4Q8WU68 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
U2AF1L4Q8WU68 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms