Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC18.07■□□□□ 0.48
LMO3Q8TAP4 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC18.07■□□□□ 0.48
LMO3Q8TAP4 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC18.07■□□□□ 0.48
LMO3Q8TAP4 AC087641.1-201ENST00000557561 1021 ntBASIC18.07■□□□□ 0.48
LMO3Q8TAP4 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC18.07■□□□□ 0.48
LMO3Q8TAP4 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LMO3Q8TAP4 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC18.07■□□□□ 0.48
LMO3Q8TAP4 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC18.07■□□□□ 0.48
LMO3Q8TAP4 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
LMO3Q8TAP4 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC18.07■□□□□ 0.48
LMO3Q8TAP4 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC18.07■□□□□ 0.48
LMO3Q8TAP4 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
LMO3Q8TAP4 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
LMO3Q8TAP4 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
LMO3Q8TAP4 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
LMO3Q8TAP4 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
LMO3Q8TAP4 AL662844.4-201ENST00000606367 2838 ntBASIC18.07■□□□□ 0.48
LMO3Q8TAP4 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
LMO3Q8TAP4 AC005052.1-201ENST00000625181 2492 ntBASIC18.07■□□□□ 0.48
LMO3Q8TAP4 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
LMO3Q8TAP4 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC18.07■□□□□ 0.48
LMO3Q8TAP4 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC18.06■□□□□ 0.48
LMO3Q8TAP4 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.06■□□□□ 0.48
LMO3Q8TAP4 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LMO3Q8TAP4 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LMO3Q8TAP4 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LMO3Q8TAP4 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LMO3Q8TAP4 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LMO3Q8TAP4 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LMO3Q8TAP4 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LMO3Q8TAP4 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC18.06■□□□□ 0.48
LMO3Q8TAP4 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LMO3Q8TAP4 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LMO3Q8TAP4 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
LMO3Q8TAP4 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
LMO3Q8TAP4 HCG4-201ENST00000418983 998 ntBASIC18.06■□□□□ 0.48
LMO3Q8TAP4 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC18.06■□□□□ 0.48
LMO3Q8TAP4 VN2R19P-201ENST00000442399 1052 ntBASIC18.06■□□□□ 0.48
LMO3Q8TAP4 HCG4B-203ENST00000450128 991 ntBASIC18.06■□□□□ 0.48
LMO3Q8TAP4 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC18.06■□□□□ 0.48
LMO3Q8TAP4 PENK-208ENST00000523051 772 ntTSL 5 BASIC18.06■□□□□ 0.48
LMO3Q8TAP4 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LMO3Q8TAP4 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC18.06■□□□□ 0.48
LMO3Q8TAP4 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
LMO3Q8TAP4 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LMO3Q8TAP4 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC18.06■□□□□ 0.48
LMO3Q8TAP4 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC18.06■□□□□ 0.48
LMO3Q8TAP4 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
LMO3Q8TAP4 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LMO3Q8TAP4 HTR7P1-202ENST00000624664 4411 ntBASIC18.06■□□□□ 0.48
LMO3Q8TAP4 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
LMO3Q8TAP4 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LMO3Q8TAP4 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
LMO3Q8TAP4 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
LMO3Q8TAP4 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LMO3Q8TAP4 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LMO3Q8TAP4 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LMO3Q8TAP4 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
LMO3Q8TAP4 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LMO3Q8TAP4 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
LMO3Q8TAP4 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LMO3Q8TAP4 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LMO3Q8TAP4 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.05■□□□□ 0.48
LMO3Q8TAP4 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC18.05■□□□□ 0.48
LMO3Q8TAP4 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LMO3Q8TAP4 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC18.05■□□□□ 0.48
LMO3Q8TAP4 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LMO3Q8TAP4 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
LMO3Q8TAP4 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
LMO3Q8TAP4 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LMO3Q8TAP4 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC18.05■□□□□ 0.48
LMO3Q8TAP4 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC18.05■□□□□ 0.48
LMO3Q8TAP4 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
LMO3Q8TAP4 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LMO3Q8TAP4 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
LMO3Q8TAP4 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LMO3Q8TAP4 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LMO3Q8TAP4 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LMO3Q8TAP4 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LMO3Q8TAP4 SLC4A1APP2-201ENST00000424054 1259 ntBASIC18.05■□□□□ 0.48
LMO3Q8TAP4 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC18.05■□□□□ 0.48
LMO3Q8TAP4 CXCL1P1-201ENST00000502804 216 ntBASIC18.05■□□□□ 0.48
LMO3Q8TAP4 AC093909.1-201ENST00000504731 1122 ntBASIC18.05■□□□□ 0.48
LMO3Q8TAP4 AC145285.3-201ENST00000564603 959 ntBASIC18.05■□□□□ 0.48
LMO3Q8TAP4 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LMO3Q8TAP4 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LMO3Q8TAP4 WT1-AS_2.1-201ENST00000613208 137 ntBASIC18.05■□□□□ 0.48
LMO3Q8TAP4 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC18.05■□□□□ 0.48
LMO3Q8TAP4 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC18.05■□□□□ 0.48
LMO3Q8TAP4 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LMO3Q8TAP4 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LMO3Q8TAP4 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LMO3Q8TAP4 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC18.05■□□□□ 0.48
LMO3Q8TAP4 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC18.05■□□□□ 0.48
LMO3Q8TAP4 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LMO3Q8TAP4 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
LMO3Q8TAP4 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
LMO3Q8TAP4 TNRC18P3-201ENST00000441896 2691 ntBASIC18.05■□□□□ 0.48
LMO3Q8TAP4 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LMO3Q8TAP4 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms