Protein–RNA interactions for Protein: Q8NDV7

TNRC6A, Trinucleotide repeat-containing gene 6A protein, humanhuman

Known RBP Predictions only

Length 1,962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6AQ8NDV7 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
TNRC6AQ8NDV7 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC15.27■□□□□ 0.04
TNRC6AQ8NDV7 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TNRC6AQ8NDV7 PGF-202ENST00000405431 666 ntTSL 5 BASIC15.27■□□□□ 0.04
TNRC6AQ8NDV7 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC15.27■□□□□ 0.04
TNRC6AQ8NDV7 CDK4-206ENST00000549606 558 ntTSL 2 BASIC15.27■□□□□ 0.04
TNRC6AQ8NDV7 AC132938.2-201ENST00000579188 680 ntBASIC15.27■□□□□ 0.04
TNRC6AQ8NDV7 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
TNRC6AQ8NDV7 MIR4492-201ENST00000581627 80 ntBASIC15.27■□□□□ 0.04
TNRC6AQ8NDV7 AL591163.1-201ENST00000641757 987 ntBASIC15.27■□□□□ 0.04
TNRC6AQ8NDV7 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TNRC6AQ8NDV7 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TNRC6AQ8NDV7 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TNRC6AQ8NDV7 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TNRC6AQ8NDV7 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TNRC6AQ8NDV7 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC15.27■□□□□ 0.04
TNRC6AQ8NDV7 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TNRC6AQ8NDV7 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
TNRC6AQ8NDV7 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
TNRC6AQ8NDV7 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TNRC6AQ8NDV7 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC15.27■□□□□ 0.04
TNRC6AQ8NDV7 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TNRC6AQ8NDV7 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TNRC6AQ8NDV7 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
TNRC6AQ8NDV7 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC15.27■□□□□ 0.03
TNRC6AQ8NDV7 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC15.27■□□□□ 0.03
TNRC6AQ8NDV7 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
TNRC6AQ8NDV7 FAM220BP-201ENST00000377689 816 ntBASIC15.27■□□□□ 0.03
TNRC6AQ8NDV7 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC15.27■□□□□ 0.03
TNRC6AQ8NDV7 HLA-V-201ENST00000429037 534 ntBASIC15.27■□□□□ 0.03
TNRC6AQ8NDV7 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC15.27■□□□□ 0.03
TNRC6AQ8NDV7 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC15.27■□□□□ 0.03
TNRC6AQ8NDV7 AC004233.3-201ENST00000607794 1269 ntBASIC15.27■□□□□ 0.03
TNRC6AQ8NDV7 TEX28P1-201ENST00000613479 1221 ntBASIC15.27■□□□□ 0.03
TNRC6AQ8NDV7 AC007967.4-201ENST00000614700 386 ntBASIC15.27■□□□□ 0.03
TNRC6AQ8NDV7 TEX28P2-201ENST00000617764 1221 ntBASIC15.27■□□□□ 0.03
TNRC6AQ8NDV7 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TNRC6AQ8NDV7 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TNRC6AQ8NDV7 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC15.27■□□□□ 0.03
TNRC6AQ8NDV7 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
TNRC6AQ8NDV7 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC15.27■□□□□ 0.03
TNRC6AQ8NDV7 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC15.27■□□□□ 0.03
TNRC6AQ8NDV7 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
TNRC6AQ8NDV7 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC15.27■□□□□ 0.03
TNRC6AQ8NDV7 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
TNRC6AQ8NDV7 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC15.27■□□□□ 0.03
TNRC6AQ8NDV7 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TNRC6AQ8NDV7 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC15.26■□□□□ 0.03
TNRC6AQ8NDV7 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
TNRC6AQ8NDV7 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC15.26■□□□□ 0.03
TNRC6AQ8NDV7 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC15.26■□□□□ 0.03
TNRC6AQ8NDV7 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TNRC6AQ8NDV7 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC15.26■□□□□ 0.03
TNRC6AQ8NDV7 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC15.26■□□□□ 0.03
TNRC6AQ8NDV7 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC15.26■□□□□ 0.03
TNRC6AQ8NDV7 AC073389.1-201ENST00000595595 795 ntBASIC15.26■□□□□ 0.03
TNRC6AQ8NDV7 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC15.26■□□□□ 0.03
TNRC6AQ8NDV7 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TNRC6AQ8NDV7 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TNRC6AQ8NDV7 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
TNRC6AQ8NDV7 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TNRC6AQ8NDV7 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
TNRC6AQ8NDV7 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
TNRC6AQ8NDV7 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TNRC6AQ8NDV7 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TNRC6AQ8NDV7 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC15.26■□□□□ 0.03
TNRC6AQ8NDV7 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TNRC6AQ8NDV7 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
TNRC6AQ8NDV7 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TNRC6AQ8NDV7 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
TNRC6AQ8NDV7 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TNRC6AQ8NDV7 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TNRC6AQ8NDV7 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC15.26■□□□□ 0.03
TNRC6AQ8NDV7 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC15.26■□□□□ 0.03
TNRC6AQ8NDV7 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TNRC6AQ8NDV7 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TNRC6AQ8NDV7 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TNRC6AQ8NDV7 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
TNRC6AQ8NDV7 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TNRC6AQ8NDV7 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TNRC6AQ8NDV7 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
TNRC6AQ8NDV7 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TNRC6AQ8NDV7 MIR346-201ENST00000362234 95 ntBASIC15.25■□□□□ 0.03
TNRC6AQ8NDV7 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TNRC6AQ8NDV7 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC15.25■□□□□ 0.03
TNRC6AQ8NDV7 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TNRC6AQ8NDV7 STOM-203ENST00000538954 1257 ntTSL 5 BASIC15.25■□□□□ 0.03
TNRC6AQ8NDV7 HILS1-202ENST00000545329 423 ntBASIC15.25■□□□□ 0.03
TNRC6AQ8NDV7 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC15.25■□□□□ 0.03
TNRC6AQ8NDV7 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC15.25■□□□□ 0.03
TNRC6AQ8NDV7 AC008738.7-201ENST00000609744 511 ntBASIC15.25■□□□□ 0.03
TNRC6AQ8NDV7 AL358472.5-202ENST00000641448 1267 ntBASIC15.25■□□□□ 0.03
TNRC6AQ8NDV7 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TNRC6AQ8NDV7 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
TNRC6AQ8NDV7 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC15.25■□□□□ 0.03
TNRC6AQ8NDV7 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TNRC6AQ8NDV7 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
TNRC6AQ8NDV7 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC15.25■□□□□ 0.03
TNRC6AQ8NDV7 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TNRC6AQ8NDV7 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms