Protein–RNA interactions for Protein: Q8ND23

CARMIL3, Capping protein, Arp2/3 and myosin-I linker protein 3, humanhuman

Predictions only

Length 1,372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3Q8ND23 CDK2AP2P3-201ENST00000422476 372 ntBASIC21.03■□□□□ 0.96
CARMIL3Q8ND23 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC21.03■□□□□ 0.96
CARMIL3Q8ND23 STARD13-205ENST00000439831 945 ntTSL 2 BASIC21.03■□□□□ 0.96
CARMIL3Q8ND23 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC21.03■□□□□ 0.96
CARMIL3Q8ND23 SATB1-217ENST00000493952 626 ntTSL 3 BASIC21.03■□□□□ 0.96
CARMIL3Q8ND23 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
CARMIL3Q8ND23 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC21.03■□□□□ 0.96
CARMIL3Q8ND23 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC21.03■□□□□ 0.96
CARMIL3Q8ND23 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC21.03■□□□□ 0.96
CARMIL3Q8ND23 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CARMIL3Q8ND23 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CARMIL3Q8ND23 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CARMIL3Q8ND23 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
CARMIL3Q8ND23 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
CARMIL3Q8ND23 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
CARMIL3Q8ND23 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC21.03■□□□□ 0.96
CARMIL3Q8ND23 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CARMIL3Q8ND23 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CARMIL3Q8ND23 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CARMIL3Q8ND23 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC21.03■□□□□ 0.96
CARMIL3Q8ND23 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CARMIL3Q8ND23 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
CARMIL3Q8ND23 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
CARMIL3Q8ND23 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC21.02■□□□□ 0.96
CARMIL3Q8ND23 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CARMIL3Q8ND23 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
CARMIL3Q8ND23 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC21.02■□□□□ 0.96
CARMIL3Q8ND23 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CARMIL3Q8ND23 U91328.1-201ENST00000437528 223 ntBASIC21.02■□□□□ 0.96
CARMIL3Q8ND23 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CARMIL3Q8ND23 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC21.02■□□□□ 0.96
CARMIL3Q8ND23 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC21.02■□□□□ 0.96
CARMIL3Q8ND23 CYP2A7P1-201ENST00000595391 815 ntBASIC21.02■□□□□ 0.96
CARMIL3Q8ND23 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
CARMIL3Q8ND23 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CARMIL3Q8ND23 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CARMIL3Q8ND23 AP3S2-216ENST00000617003 1561 ntBASIC21.02■□□□□ 0.96
CARMIL3Q8ND23 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
CARMIL3Q8ND23 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CARMIL3Q8ND23 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.95
CARMIL3Q8ND23 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
CARMIL3Q8ND23 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
CARMIL3Q8ND23 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CARMIL3Q8ND23 HNRNPA3P1-201ENST00000401429 1139 ntBASIC21.01■□□□□ 0.95
CARMIL3Q8ND23 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC21.01■□□□□ 0.95
CARMIL3Q8ND23 HNRNPA3P5-201ENST00000455201 833 ntBASIC21.01■□□□□ 0.95
CARMIL3Q8ND23 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC21.01■□□□□ 0.95
CARMIL3Q8ND23 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC21.01■□□□□ 0.95
CARMIL3Q8ND23 HLA-V-204ENST00000476601 1289 ntBASIC21.01■□□□□ 0.95
CARMIL3Q8ND23 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC21.01■□□□□ 0.95
CARMIL3Q8ND23 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC21.01■□□□□ 0.95
CARMIL3Q8ND23 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC21.01■□□□□ 0.95
CARMIL3Q8ND23 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
CARMIL3Q8ND23 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
CARMIL3Q8ND23 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC21.01■□□□□ 0.95
CARMIL3Q8ND23 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC21.01■□□□□ 0.95
CARMIL3Q8ND23 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC21.01■□□□□ 0.95
CARMIL3Q8ND23 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC21.01■□□□□ 0.95
CARMIL3Q8ND23 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
CARMIL3Q8ND23 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CARMIL3Q8ND23 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
CARMIL3Q8ND23 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CARMIL3Q8ND23 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
CARMIL3Q8ND23 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
CARMIL3Q8ND23 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CARMIL3Q8ND23 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CARMIL3Q8ND23 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CARMIL3Q8ND23 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
CARMIL3Q8ND23 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CARMIL3Q8ND23 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CARMIL3Q8ND23 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CARMIL3Q8ND23 SLC9A3P2-201ENST00000447821 2021 ntBASIC21.01■□□□□ 0.95
CARMIL3Q8ND23 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC21.01■□□□□ 0.95
CARMIL3Q8ND23 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
CARMIL3Q8ND23 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC21■□□□□ 0.95
CARMIL3Q8ND23 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC21■□□□□ 0.95
CARMIL3Q8ND23 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CARMIL3Q8ND23 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
CARMIL3Q8ND23 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC21■□□□□ 0.95
CARMIL3Q8ND23 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC21■□□□□ 0.95
CARMIL3Q8ND23 AC004233.3-201ENST00000607794 1269 ntBASIC21■□□□□ 0.95
CARMIL3Q8ND23 AC003101.2-201ENST00000612557 442 ntBASIC21■□□□□ 0.95
CARMIL3Q8ND23 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC21■□□□□ 0.95
CARMIL3Q8ND23 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC21■□□□□ 0.95
CARMIL3Q8ND23 FOXO1B-201ENST00000504678 1527 ntBASIC21■□□□□ 0.95
CARMIL3Q8ND23 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CARMIL3Q8ND23 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC21■□□□□ 0.95
CARMIL3Q8ND23 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC21■□□□□ 0.95
CARMIL3Q8ND23 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
CARMIL3Q8ND23 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
CARMIL3Q8ND23 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CARMIL3Q8ND23 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC21■□□□□ 0.95
CARMIL3Q8ND23 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
CARMIL3Q8ND23 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC21■□□□□ 0.95
CARMIL3Q8ND23 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC21■□□□□ 0.95
CARMIL3Q8ND23 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC21■□□□□ 0.95
CARMIL3Q8ND23 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CARMIL3Q8ND23 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC21■□□□□ 0.95
CARMIL3Q8ND23 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC21■□□□□ 0.95
CARMIL3Q8ND23 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms