Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.62■□□□□ 0.25
TRIM48Q8IWZ4 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM48Q8IWZ4 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM48Q8IWZ4 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM48Q8IWZ4 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM48Q8IWZ4 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.62■□□□□ 0.25
TRIM48Q8IWZ4 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.62■□□□□ 0.25
TRIM48Q8IWZ4 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
TRIM48Q8IWZ4 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM48Q8IWZ4 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM48Q8IWZ4 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.62■□□□□ 0.25
TRIM48Q8IWZ4 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.62■□□□□ 0.25
TRIM48Q8IWZ4 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM48Q8IWZ4 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM48Q8IWZ4 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC16.62■□□□□ 0.25
TRIM48Q8IWZ4 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM48Q8IWZ4 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM48Q8IWZ4 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM48Q8IWZ4 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM48Q8IWZ4 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC16.62■□□□□ 0.25
TRIM48Q8IWZ4 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM48Q8IWZ4 SMN2-210ENST00000511812 867 ntTSL 2 BASIC16.62■□□□□ 0.25
TRIM48Q8IWZ4 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC16.62■□□□□ 0.25
TRIM48Q8IWZ4 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC16.62■□□□□ 0.25
TRIM48Q8IWZ4 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC16.62■□□□□ 0.25
TRIM48Q8IWZ4 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM48Q8IWZ4 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC16.62■□□□□ 0.25
TRIM48Q8IWZ4 AC023141.13-201ENST00000604991 943 ntBASIC16.62■□□□□ 0.25
TRIM48Q8IWZ4 AC004877.2-201ENST00000623941 599 ntBASIC16.62■□□□□ 0.25
TRIM48Q8IWZ4 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
TRIM48Q8IWZ4 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM48Q8IWZ4 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM48Q8IWZ4 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM48Q8IWZ4 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.62■□□□□ 0.25
TRIM48Q8IWZ4 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM48Q8IWZ4 AC129492.6-201ENST00000611383 1305 ntBASIC16.62■□□□□ 0.25
TRIM48Q8IWZ4 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM48Q8IWZ4 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM48Q8IWZ4 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM48Q8IWZ4 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM48Q8IWZ4 HNRNPRP1-201ENST00000453465 1695 ntBASIC16.62■□□□□ 0.25
TRIM48Q8IWZ4 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
TRIM48Q8IWZ4 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC16.62■□□□□ 0.25
TRIM48Q8IWZ4 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM48Q8IWZ4 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM48Q8IWZ4 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM48Q8IWZ4 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM48Q8IWZ4 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM48Q8IWZ4 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM48Q8IWZ4 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM48Q8IWZ4 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM48Q8IWZ4 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
TRIM48Q8IWZ4 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM48Q8IWZ4 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM48Q8IWZ4 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.61■□□□□ 0.25
TRIM48Q8IWZ4 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.61■□□□□ 0.25
TRIM48Q8IWZ4 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM48Q8IWZ4 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM48Q8IWZ4 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM48Q8IWZ4 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM48Q8IWZ4 UPF3AP3-201ENST00000420996 769 ntBASIC16.61■□□□□ 0.25
TRIM48Q8IWZ4 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC16.61■□□□□ 0.25
TRIM48Q8IWZ4 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM48Q8IWZ4 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC16.61■□□□□ 0.25
TRIM48Q8IWZ4 AL513480.1-201ENST00000451731 511 ntBASIC16.61■□□□□ 0.25
TRIM48Q8IWZ4 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC16.61■□□□□ 0.25
TRIM48Q8IWZ4 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC16.61■□□□□ 0.25
TRIM48Q8IWZ4 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC16.61■□□□□ 0.25
TRIM48Q8IWZ4 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC16.61■□□□□ 0.25
TRIM48Q8IWZ4 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM48Q8IWZ4 AC139530.3-201ENST00000620344 690 ntBASIC16.61■□□□□ 0.25
TRIM48Q8IWZ4 HOTTIP_1.1-201ENST00000620415 57 ntBASIC16.61■□□□□ 0.25
TRIM48Q8IWZ4 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
TRIM48Q8IWZ4 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM48Q8IWZ4 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
TRIM48Q8IWZ4 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM48Q8IWZ4 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM48Q8IWZ4 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM48Q8IWZ4 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
TRIM48Q8IWZ4 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
TRIM48Q8IWZ4 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM48Q8IWZ4 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM48Q8IWZ4 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM48Q8IWZ4 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.61■□□□□ 0.25
TRIM48Q8IWZ4 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM48Q8IWZ4 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM48Q8IWZ4 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM48Q8IWZ4 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM48Q8IWZ4 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM48Q8IWZ4 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM48Q8IWZ4 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM48Q8IWZ4 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM48Q8IWZ4 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM48Q8IWZ4 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM48Q8IWZ4 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.6■□□□□ 0.25
TRIM48Q8IWZ4 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM48Q8IWZ4 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM48Q8IWZ4 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16.6■□□□□ 0.25
TRIM48Q8IWZ4 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.6■□□□□ 0.25
TRIM48Q8IWZ4 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms