Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
HERC6Q8IVU3 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HERC6Q8IVU3 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HERC6Q8IVU3 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC18.24■□□□□ 0.51
HERC6Q8IVU3 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
HERC6Q8IVU3 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.24■□□□□ 0.51
HERC6Q8IVU3 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HERC6Q8IVU3 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
HERC6Q8IVU3 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HERC6Q8IVU3 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HERC6Q8IVU3 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
HERC6Q8IVU3 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
HERC6Q8IVU3 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HERC6Q8IVU3 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HERC6Q8IVU3 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
HERC6Q8IVU3 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
HERC6Q8IVU3 CALY-202ENST00000368555 783 ntTSL 2 BASIC18.24■□□□□ 0.51
HERC6Q8IVU3 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC18.24■□□□□ 0.51
HERC6Q8IVU3 MTRF1LP2-201ENST00000506027 1122 ntBASIC18.24■□□□□ 0.51
HERC6Q8IVU3 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC18.24■□□□□ 0.51
HERC6Q8IVU3 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC18.24■□□□□ 0.51
HERC6Q8IVU3 SERF2-217ENST00000630046 862 ntTSL 5 BASIC18.24■□□□□ 0.51
HERC6Q8IVU3 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HERC6Q8IVU3 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HERC6Q8IVU3 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.24■□□□□ 0.51
HERC6Q8IVU3 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
HERC6Q8IVU3 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
HERC6Q8IVU3 AC022144.1-201ENST00000602255 1580 ntBASIC18.24■□□□□ 0.51
HERC6Q8IVU3 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
HERC6Q8IVU3 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
HERC6Q8IVU3 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
HERC6Q8IVU3 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
HERC6Q8IVU3 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
HERC6Q8IVU3 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
HERC6Q8IVU3 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
HERC6Q8IVU3 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HERC6Q8IVU3 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC18.23■□□□□ 0.51
HERC6Q8IVU3 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.23■□□□□ 0.51
HERC6Q8IVU3 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
HERC6Q8IVU3 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.23■□□□□ 0.51
HERC6Q8IVU3 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HERC6Q8IVU3 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
HERC6Q8IVU3 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC18.23■□□□□ 0.51
HERC6Q8IVU3 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HERC6Q8IVU3 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HERC6Q8IVU3 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
HERC6Q8IVU3 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
HERC6Q8IVU3 RNU1-129P-201ENST00000384064 167 ntBASIC18.23■□□□□ 0.51
HERC6Q8IVU3 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HERC6Q8IVU3 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HERC6Q8IVU3 HCG4-201ENST00000418983 998 ntBASIC18.23■□□□□ 0.51
HERC6Q8IVU3 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC18.23■□□□□ 0.51
HERC6Q8IVU3 KRT17P7-201ENST00000451704 1104 ntBASIC18.23■□□□□ 0.51
HERC6Q8IVU3 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC18.23■□□□□ 0.51
HERC6Q8IVU3 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
HERC6Q8IVU3 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
HERC6Q8IVU3 U1.21-201ENST00000580816 167 ntBASIC18.23■□□□□ 0.51
HERC6Q8IVU3 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC18.23■□□□□ 0.51
HERC6Q8IVU3 AL031055.1-201ENST00000606362 631 ntBASIC18.23■□□□□ 0.51
HERC6Q8IVU3 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC18.23■□□□□ 0.51
HERC6Q8IVU3 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
HERC6Q8IVU3 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC18.23■□□□□ 0.51
HERC6Q8IVU3 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
HERC6Q8IVU3 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
HERC6Q8IVU3 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.23■□□□□ 0.51
HERC6Q8IVU3 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HERC6Q8IVU3 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HERC6Q8IVU3 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HERC6Q8IVU3 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC18.23■□□□□ 0.51
HERC6Q8IVU3 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
HERC6Q8IVU3 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
HERC6Q8IVU3 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
HERC6Q8IVU3 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HERC6Q8IVU3 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
HERC6Q8IVU3 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
HERC6Q8IVU3 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HERC6Q8IVU3 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HERC6Q8IVU3 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.22■□□□□ 0.51
HERC6Q8IVU3 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.22■□□□□ 0.51
HERC6Q8IVU3 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HERC6Q8IVU3 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC18.22■□□□□ 0.51
HERC6Q8IVU3 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
HERC6Q8IVU3 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HERC6Q8IVU3 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HERC6Q8IVU3 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
HERC6Q8IVU3 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HERC6Q8IVU3 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
HERC6Q8IVU3 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC18.22■□□□□ 0.51
HERC6Q8IVU3 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC18.22■□□□□ 0.51
HERC6Q8IVU3 ATP5G2P4-201ENST00000442175 420 ntBASIC18.22■□□□□ 0.51
HERC6Q8IVU3 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC18.22■□□□□ 0.51
HERC6Q8IVU3 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
HERC6Q8IVU3 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC18.22■□□□□ 0.51
HERC6Q8IVU3 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC18.22■□□□□ 0.51
HERC6Q8IVU3 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HERC6Q8IVU3 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
HERC6Q8IVU3 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC18.22■□□□□ 0.51
HERC6Q8IVU3 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC18.22■□□□□ 0.51
HERC6Q8IVU3 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
HERC6Q8IVU3 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms