Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 GSN-206ENST00000394353 2311 ntTSL 2 BASIC14.89□□□□□ -0.03
LYSMD2Q8IV50 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LYSMD2Q8IV50 C8orf49-201ENST00000525043 1968 ntBASIC14.89□□□□□ -0.03
LYSMD2Q8IV50 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
LYSMD2Q8IV50 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
LYSMD2Q8IV50 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LYSMD2Q8IV50 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC14.89□□□□□ -0.03
LYSMD2Q8IV50 LCK-206ENST00000373564 2137 ntTSL 5 BASIC14.89□□□□□ -0.03
LYSMD2Q8IV50 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LYSMD2Q8IV50 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LYSMD2Q8IV50 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
LYSMD2Q8IV50 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
LYSMD2Q8IV50 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
LYSMD2Q8IV50 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
LYSMD2Q8IV50 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC14.89□□□□□ -0.03
LYSMD2Q8IV50 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LYSMD2Q8IV50 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LYSMD2Q8IV50 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC14.89□□□□□ -0.03
LYSMD2Q8IV50 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LYSMD2Q8IV50 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC14.89□□□□□ -0.03
LYSMD2Q8IV50 SLC25A1P2-201ENST00000430693 912 ntBASIC14.89□□□□□ -0.03
LYSMD2Q8IV50 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
LYSMD2Q8IV50 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC14.89□□□□□ -0.03
LYSMD2Q8IV50 AP002490.2-201ENST00000524791 560 ntBASIC14.89□□□□□ -0.03
LYSMD2Q8IV50 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC14.89□□□□□ -0.03
LYSMD2Q8IV50 AC008687.5-201ENST00000593746 558 ntBASIC14.89□□□□□ -0.03
LYSMD2Q8IV50 GRAMD4P8-201ENST00000605465 1115 ntBASIC14.89□□□□□ -0.03
LYSMD2Q8IV50 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
LYSMD2Q8IV50 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
LYSMD2Q8IV50 GCK-202ENST00000345378 2421 ntTSL 2 BASIC14.89□□□□□ -0.03
LYSMD2Q8IV50 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LYSMD2Q8IV50 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
LYSMD2Q8IV50 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
LYSMD2Q8IV50 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
LYSMD2Q8IV50 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC14.89□□□□□ -0.03
LYSMD2Q8IV50 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
LYSMD2Q8IV50 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LYSMD2Q8IV50 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LYSMD2Q8IV50 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LYSMD2Q8IV50 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LYSMD2Q8IV50 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
LYSMD2Q8IV50 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC14.89□□□□□ -0.03
LYSMD2Q8IV50 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
LYSMD2Q8IV50 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LYSMD2Q8IV50 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LYSMD2Q8IV50 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
LYSMD2Q8IV50 HARS-204ENST00000438307 1789 ntTSL 2 BASIC14.88□□□□□ -0.03
LYSMD2Q8IV50 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
LYSMD2Q8IV50 AC106881.1-201ENST00000605849 3329 ntBASIC14.88□□□□□ -0.03
LYSMD2Q8IV50 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LYSMD2Q8IV50 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14.88□□□□□ -0.03
LYSMD2Q8IV50 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
LYSMD2Q8IV50 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC14.88□□□□□ -0.03
LYSMD2Q8IV50 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC14.88□□□□□ -0.03
LYSMD2Q8IV50 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC14.88□□□□□ -0.03
LYSMD2Q8IV50 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC14.88□□□□□ -0.03
LYSMD2Q8IV50 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC14.88□□□□□ -0.03
LYSMD2Q8IV50 EMC9-206ENST00000560403 872 ntTSL 2 BASIC14.88□□□□□ -0.03
LYSMD2Q8IV50 REXO1L10P-201ENST00000615707 1290 ntBASIC14.88□□□□□ -0.03
LYSMD2Q8IV50 REXO1L12P-201ENST00000622156 912 ntBASIC14.88□□□□□ -0.03
LYSMD2Q8IV50 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
LYSMD2Q8IV50 AL135905.2-201ENST00000584934 1404 ntBASIC14.88□□□□□ -0.03
LYSMD2Q8IV50 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
LYSMD2Q8IV50 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LYSMD2Q8IV50 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LYSMD2Q8IV50 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC14.88□□□□□ -0.03
LYSMD2Q8IV50 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LYSMD2Q8IV50 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
LYSMD2Q8IV50 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
LYSMD2Q8IV50 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LYSMD2Q8IV50 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LYSMD2Q8IV50 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LYSMD2Q8IV50 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LYSMD2Q8IV50 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC14.88□□□□□ -0.03
LYSMD2Q8IV50 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LYSMD2Q8IV50 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LYSMD2Q8IV50 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
LYSMD2Q8IV50 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC14.88□□□□□ -0.03
LYSMD2Q8IV50 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
LYSMD2Q8IV50 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC14.88□□□□□ -0.03
LYSMD2Q8IV50 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
LYSMD2Q8IV50 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
LYSMD2Q8IV50 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
LYSMD2Q8IV50 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LYSMD2Q8IV50 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC14.87□□□□□ -0.03
LYSMD2Q8IV50 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LYSMD2Q8IV50 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC14.87□□□□□ -0.03
LYSMD2Q8IV50 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LYSMD2Q8IV50 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LYSMD2Q8IV50 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
LYSMD2Q8IV50 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LYSMD2Q8IV50 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
LYSMD2Q8IV50 AMT-206ENST00000458307 1860 ntTSL 2 BASIC14.87□□□□□ -0.03
LYSMD2Q8IV50 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
LYSMD2Q8IV50 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC14.87□□□□□ -0.03
LYSMD2Q8IV50 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LYSMD2Q8IV50 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LYSMD2Q8IV50 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LYSMD2Q8IV50 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LYSMD2Q8IV50 PRR31-201ENST00000371629 978 ntTSL 2 BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms