Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RNF135Q8IUD6 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
RNF135Q8IUD6 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNF135Q8IUD6 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNF135Q8IUD6 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RNF135Q8IUD6 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.96■□□□□ 0.47
RNF135Q8IUD6 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.96■□□□□ 0.47
RNF135Q8IUD6 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
RNF135Q8IUD6 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RNF135Q8IUD6 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.96■□□□□ 0.47
RNF135Q8IUD6 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNF135Q8IUD6 PI4KAP1-204ENST00000612579 1703 ntBASIC17.96■□□□□ 0.47
RNF135Q8IUD6 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNF135Q8IUD6 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.96■□□□□ 0.47
RNF135Q8IUD6 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNF135Q8IUD6 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNF135Q8IUD6 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNF135Q8IUD6 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNF135Q8IUD6 AC002056.1-201ENST00000395613 760 ntBASIC17.96■□□□□ 0.47
RNF135Q8IUD6 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC17.96■□□□□ 0.47
RNF135Q8IUD6 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC17.96■□□□□ 0.47
RNF135Q8IUD6 SPDYE11-202ENST00000450699 704 ntBASIC17.96■□□□□ 0.47
RNF135Q8IUD6 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC17.96■□□□□ 0.47
RNF135Q8IUD6 SPDYE9P-201ENST00000570642 692 ntBASIC17.96■□□□□ 0.47
RNF135Q8IUD6 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC17.96■□□□□ 0.47
RNF135Q8IUD6 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC17.96■□□□□ 0.47
RNF135Q8IUD6 SPDYE10P-202ENST00000612005 668 ntBASIC17.96■□□□□ 0.47
RNF135Q8IUD6 SPDYE8P-202ENST00000612377 668 ntBASIC17.96■□□□□ 0.47
RNF135Q8IUD6 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC17.96■□□□□ 0.47
RNF135Q8IUD6 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC17.96■□□□□ 0.47
RNF135Q8IUD6 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
RNF135Q8IUD6 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
RNF135Q8IUD6 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNF135Q8IUD6 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.96■□□□□ 0.47
RNF135Q8IUD6 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNF135Q8IUD6 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNF135Q8IUD6 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNF135Q8IUD6 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNF135Q8IUD6 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
RNF135Q8IUD6 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF135Q8IUD6 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.95■□□□□ 0.46
RNF135Q8IUD6 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF135Q8IUD6 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
RNF135Q8IUD6 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
RNF135Q8IUD6 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.95■□□□□ 0.46
RNF135Q8IUD6 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.95■□□□□ 0.46
RNF135Q8IUD6 FO538757.1-201ENST00000623083 1397 ntBASIC17.95■□□□□ 0.46
RNF135Q8IUD6 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF135Q8IUD6 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF135Q8IUD6 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RNF135Q8IUD6 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF135Q8IUD6 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.95■□□□□ 0.46
RNF135Q8IUD6 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC17.95■□□□□ 0.46
RNF135Q8IUD6 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC17.95■□□□□ 0.46
RNF135Q8IUD6 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RNF135Q8IUD6 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RNF135Q8IUD6 AL355306.1-201ENST00000415580 579 ntBASIC17.95■□□□□ 0.46
RNF135Q8IUD6 GOLGA6L11P-201ENST00000417252 1298 ntBASIC17.95■□□□□ 0.46
RNF135Q8IUD6 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC17.95■□□□□ 0.46
RNF135Q8IUD6 AL592309.1-201ENST00000443127 649 ntBASIC17.95■□□□□ 0.46
RNF135Q8IUD6 FAM185BP-201ENST00000443595 716 ntBASIC17.95■□□□□ 0.46
RNF135Q8IUD6 CRB3P1-201ENST00000449338 276 ntBASIC17.95■□□□□ 0.46
RNF135Q8IUD6 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC17.95■□□□□ 0.46
RNF135Q8IUD6 AL513480.1-201ENST00000451731 511 ntBASIC17.95■□□□□ 0.46
RNF135Q8IUD6 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
RNF135Q8IUD6 FAM86C2P-203ENST00000528684 1004 ntBASIC17.95■□□□□ 0.46
RNF135Q8IUD6 AC027307.3-201ENST00000594262 1100 ntBASIC17.95■□□□□ 0.46
RNF135Q8IUD6 AP001059.3-201ENST00000619053 235 ntBASIC17.95■□□□□ 0.46
RNF135Q8IUD6 AC079416.2-201ENST00000625035 1193 ntBASIC17.95■□□□□ 0.46
RNF135Q8IUD6 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF135Q8IUD6 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF135Q8IUD6 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF135Q8IUD6 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF135Q8IUD6 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF135Q8IUD6 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.95■□□□□ 0.46
RNF135Q8IUD6 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
RNF135Q8IUD6 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.95■□□□□ 0.46
RNF135Q8IUD6 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
RNF135Q8IUD6 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF135Q8IUD6 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.95■□□□□ 0.46
RNF135Q8IUD6 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
RNF135Q8IUD6 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RNF135Q8IUD6 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.94■□□□□ 0.46
RNF135Q8IUD6 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.94■□□□□ 0.46
RNF135Q8IUD6 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RNF135Q8IUD6 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNF135Q8IUD6 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC17.94■□□□□ 0.46
RNF135Q8IUD6 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.94■□□□□ 0.46
RNF135Q8IUD6 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
RNF135Q8IUD6 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
RNF135Q8IUD6 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNF135Q8IUD6 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNF135Q8IUD6 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
RNF135Q8IUD6 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.94■□□□□ 0.46
RNF135Q8IUD6 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNF135Q8IUD6 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.94■□□□□ 0.46
RNF135Q8IUD6 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNF135Q8IUD6 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC17.94■□□□□ 0.46
RNF135Q8IUD6 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNF135Q8IUD6 RPL30-202ENST00000396070 440 ntTSL 2 BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms