Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC10.95□□□□□ -0.66
MRPL55Q7Z7F7 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
MRPL55Q7Z7F7 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
MRPL55Q7Z7F7 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
MRPL55Q7Z7F7 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
MRPL55Q7Z7F7 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
MRPL55Q7Z7F7 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
MRPL55Q7Z7F7 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
MRPL55Q7Z7F7 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
MRPL55Q7Z7F7 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
MRPL55Q7Z7F7 AL135999.2-201ENST00000622438 1686 ntBASIC10.95□□□□□ -0.66
MRPL55Q7Z7F7 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
MRPL55Q7Z7F7 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
MRPL55Q7Z7F7 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
MRPL55Q7Z7F7 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC10.95□□□□□ -0.66
MRPL55Q7Z7F7 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
MRPL55Q7Z7F7 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
MRPL55Q7Z7F7 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
MRPL55Q7Z7F7 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
MRPL55Q7Z7F7 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
MRPL55Q7Z7F7 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC10.94□□□□□ -0.66
MRPL55Q7Z7F7 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
MRPL55Q7Z7F7 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC10.94□□□□□ -0.66
MRPL55Q7Z7F7 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC10.94□□□□□ -0.66
MRPL55Q7Z7F7 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
MRPL55Q7Z7F7 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC10.94□□□□□ -0.66
MRPL55Q7Z7F7 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
MRPL55Q7Z7F7 AC233702.3-201ENST00000578656 1387 ntBASIC10.94□□□□□ -0.66
MRPL55Q7Z7F7 AC092053.1-201ENST00000605787 1936 ntBASIC10.94□□□□□ -0.66
MRPL55Q7Z7F7 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC10.94□□□□□ -0.66
MRPL55Q7Z7F7 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC10.94□□□□□ -0.66
MRPL55Q7Z7F7 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
MRPL55Q7Z7F7 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
MRPL55Q7Z7F7 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC10.94□□□□□ -0.66
MRPL55Q7Z7F7 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
MRPL55Q7Z7F7 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
MRPL55Q7Z7F7 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
MRPL55Q7Z7F7 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC10.94□□□□□ -0.66
MRPL55Q7Z7F7 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
MRPL55Q7Z7F7 CCS-201ENST00000310190 942 ntTSL 5 BASIC10.94□□□□□ -0.66
MRPL55Q7Z7F7 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
MRPL55Q7Z7F7 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
MRPL55Q7Z7F7 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
MRPL55Q7Z7F7 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
MRPL55Q7Z7F7 SLC25A1P3-201ENST00000395415 828 ntBASIC10.94□□□□□ -0.66
MRPL55Q7Z7F7 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
MRPL55Q7Z7F7 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC10.94□□□□□ -0.66
MRPL55Q7Z7F7 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
MRPL55Q7Z7F7 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC10.94□□□□□ -0.66
MRPL55Q7Z7F7 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC10.94□□□□□ -0.66
MRPL55Q7Z7F7 FAM86EP-206ENST00000510506 987 ntBASIC10.94□□□□□ -0.66
MRPL55Q7Z7F7 AC096582.2-201ENST00000510860 516 ntBASIC10.94□□□□□ -0.66
MRPL55Q7Z7F7 PTK2-216ENST00000519881 863 ntTSL 3 BASIC10.94□□□□□ -0.66
MRPL55Q7Z7F7 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC10.94□□□□□ -0.66
MRPL55Q7Z7F7 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC10.94□□□□□ -0.66
MRPL55Q7Z7F7 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC10.94□□□□□ -0.66
MRPL55Q7Z7F7 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC10.94□□□□□ -0.66
MRPL55Q7Z7F7 AC073592.5-201ENST00000624854 528 ntBASIC10.94□□□□□ -0.66
MRPL55Q7Z7F7 AL590326.2-201ENST00000625139 305 ntBASIC10.94□□□□□ -0.66
MRPL55Q7Z7F7 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
MRPL55Q7Z7F7 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
MRPL55Q7Z7F7 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
MRPL55Q7Z7F7 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
MRPL55Q7Z7F7 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC10.94□□□□□ -0.66
MRPL55Q7Z7F7 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
MRPL55Q7Z7F7 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
MRPL55Q7Z7F7 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
MRPL55Q7Z7F7 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
MRPL55Q7Z7F7 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
MRPL55Q7Z7F7 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC10.94□□□□□ -0.66
MRPL55Q7Z7F7 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC10.94□□□□□ -0.66
MRPL55Q7Z7F7 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC10.94□□□□□ -0.66
MRPL55Q7Z7F7 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
MRPL55Q7Z7F7 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC10.94□□□□□ -0.66
MRPL55Q7Z7F7 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
MRPL55Q7Z7F7 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
MRPL55Q7Z7F7 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
MRPL55Q7Z7F7 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
MRPL55Q7Z7F7 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC10.94□□□□□ -0.66
MRPL55Q7Z7F7 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
MRPL55Q7Z7F7 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
MRPL55Q7Z7F7 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
MRPL55Q7Z7F7 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
MRPL55Q7Z7F7 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC10.93□□□□□ -0.66
MRPL55Q7Z7F7 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
MRPL55Q7Z7F7 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC10.93□□□□□ -0.66
MRPL55Q7Z7F7 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC10.93□□□□□ -0.66
MRPL55Q7Z7F7 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
MRPL55Q7Z7F7 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
MRPL55Q7Z7F7 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
MRPL55Q7Z7F7 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
MRPL55Q7Z7F7 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
MRPL55Q7Z7F7 IER3-202ENST00000376377 1350 ntBASIC10.93□□□□□ -0.66
MRPL55Q7Z7F7 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
MRPL55Q7Z7F7 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC10.93□□□□□ -0.66
MRPL55Q7Z7F7 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
MRPL55Q7Z7F7 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
MRPL55Q7Z7F7 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC10.93□□□□□ -0.66
MRPL55Q7Z7F7 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
MRPL55Q7Z7F7 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms