Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
CSMD2Q7Z408 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC14.05□□□□□ -0.16
CSMD2Q7Z408 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
CSMD2Q7Z408 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
CSMD2Q7Z408 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
CSMD2Q7Z408 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
CSMD2Q7Z408 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CSMD2Q7Z408 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CSMD2Q7Z408 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CSMD2Q7Z408 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CSMD2Q7Z408 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC14.05□□□□□ -0.16
CSMD2Q7Z408 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC14.05□□□□□ -0.16
CSMD2Q7Z408 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC14.05□□□□□ -0.16
CSMD2Q7Z408 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CSMD2Q7Z408 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC14.05□□□□□ -0.16
CSMD2Q7Z408 MIR3615-201ENST00000581999 87 ntBASIC14.05□□□□□ -0.16
CSMD2Q7Z408 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC14.04□□□□□ -0.16
CSMD2Q7Z408 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC14.04□□□□□ -0.16
CSMD2Q7Z408 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CSMD2Q7Z408 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC14.04□□□□□ -0.16
CSMD2Q7Z408 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC14.04□□□□□ -0.16
CSMD2Q7Z408 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC14.04□□□□□ -0.16
CSMD2Q7Z408 AC006538.1-201ENST00000567905 1585 ntBASIC14.04□□□□□ -0.16
CSMD2Q7Z408 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CSMD2Q7Z408 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC14.04□□□□□ -0.16
CSMD2Q7Z408 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC14.04□□□□□ -0.16
CSMD2Q7Z408 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CSMD2Q7Z408 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CSMD2Q7Z408 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CSMD2Q7Z408 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CSMD2Q7Z408 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC14.04□□□□□ -0.16
CSMD2Q7Z408 AC055876.2-201ENST00000531834 546 ntBASIC14.04□□□□□ -0.16
CSMD2Q7Z408 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC14.04□□□□□ -0.16
CSMD2Q7Z408 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CSMD2Q7Z408 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC14.04□□□□□ -0.16
CSMD2Q7Z408 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC14.04□□□□□ -0.16
CSMD2Q7Z408 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC14.04□□□□□ -0.16
CSMD2Q7Z408 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC14.04□□□□□ -0.16
CSMD2Q7Z408 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CSMD2Q7Z408 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CSMD2Q7Z408 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CSMD2Q7Z408 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CSMD2Q7Z408 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
CSMD2Q7Z408 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
CSMD2Q7Z408 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC14.04□□□□□ -0.16
CSMD2Q7Z408 MIR1247-201ENST00000408206 136 ntBASIC14.04□□□□□ -0.16
CSMD2Q7Z408 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC14.04□□□□□ -0.16
CSMD2Q7Z408 MIR8072-201ENST00000614241 80 ntBASIC14.04□□□□□ -0.16
CSMD2Q7Z408 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CSMD2Q7Z408 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
CSMD2Q7Z408 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CSMD2Q7Z408 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC14.04□□□□□ -0.16
CSMD2Q7Z408 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC14.04□□□□□ -0.16
CSMD2Q7Z408 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC14.04□□□□□ -0.16
CSMD2Q7Z408 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CSMD2Q7Z408 CD276-203ENST00000537340 2439 ntTSL 2 BASIC14.04□□□□□ -0.16
CSMD2Q7Z408 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
CSMD2Q7Z408 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CSMD2Q7Z408 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CSMD2Q7Z408 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CSMD2Q7Z408 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CSMD2Q7Z408 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC14.03□□□□□ -0.16
CSMD2Q7Z408 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
CSMD2Q7Z408 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC14.03□□□□□ -0.16
CSMD2Q7Z408 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC14.03□□□□□ -0.16
CSMD2Q7Z408 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CSMD2Q7Z408 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC14.03□□□□□ -0.16
CSMD2Q7Z408 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC14.03□□□□□ -0.16
CSMD2Q7Z408 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
CSMD2Q7Z408 AC105129.2-201ENST00000559536 390 ntBASIC14.03□□□□□ -0.16
CSMD2Q7Z408 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC14.03□□□□□ -0.16
CSMD2Q7Z408 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC14.03□□□□□ -0.16
CSMD2Q7Z408 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
CSMD2Q7Z408 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CSMD2Q7Z408 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
CSMD2Q7Z408 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CSMD2Q7Z408 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CSMD2Q7Z408 MPV17-206ENST00000402722 827 ntTSL 3 BASIC14.03□□□□□ -0.16
CSMD2Q7Z408 AL512361.1-201ENST00000554200 418 ntBASIC14.03□□□□□ -0.16
CSMD2Q7Z408 AL079307.3-201ENST00000556114 283 ntBASIC14.03□□□□□ -0.16
CSMD2Q7Z408 SRD5A3P1-201ENST00000603021 949 ntBASIC14.03□□□□□ -0.16
CSMD2Q7Z408 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC14.03□□□□□ -0.16
CSMD2Q7Z408 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
CSMD2Q7Z408 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CSMD2Q7Z408 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC14.03□□□□□ -0.16
CSMD2Q7Z408 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CSMD2Q7Z408 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
CSMD2Q7Z408 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC14.03□□□□□ -0.16
CSMD2Q7Z408 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC14.03□□□□□ -0.16
CSMD2Q7Z408 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CSMD2Q7Z408 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
CSMD2Q7Z408 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC14.03□□□□□ -0.16
CSMD2Q7Z408 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CSMD2Q7Z408 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CSMD2Q7Z408 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CSMD2Q7Z408 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC14.03□□□□□ -0.16
CSMD2Q7Z408 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC14.03□□□□□ -0.16
CSMD2Q7Z408 IGHJ2P-201ENST00000454480 60 ntBASIC14.03□□□□□ -0.16
CSMD2Q7Z408 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CSMD2Q7Z408 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms