Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
NHLRC1Q6VVB1 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC15.24■□□□□ 0.03
NHLRC1Q6VVB1 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC15.24■□□□□ 0.03
NHLRC1Q6VVB1 RN7SL510P-201ENST00000581311 263 ntBASIC15.24■□□□□ 0.03
NHLRC1Q6VVB1 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC15.24■□□□□ 0.03
NHLRC1Q6VVB1 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NHLRC1Q6VVB1 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NHLRC1Q6VVB1 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
NHLRC1Q6VVB1 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NHLRC1Q6VVB1 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
NHLRC1Q6VVB1 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NHLRC1Q6VVB1 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
NHLRC1Q6VVB1 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC15.24■□□□□ 0.03
NHLRC1Q6VVB1 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NHLRC1Q6VVB1 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NHLRC1Q6VVB1 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NHLRC1Q6VVB1 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
NHLRC1Q6VVB1 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NHLRC1Q6VVB1 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC15.23■□□□□ 0.03
NHLRC1Q6VVB1 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NHLRC1Q6VVB1 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC15.23■□□□□ 0.03
NHLRC1Q6VVB1 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NHLRC1Q6VVB1 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
NHLRC1Q6VVB1 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NHLRC1Q6VVB1 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NHLRC1Q6VVB1 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
NHLRC1Q6VVB1 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
NHLRC1Q6VVB1 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC15.23■□□□□ 0.03
NHLRC1Q6VVB1 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
NHLRC1Q6VVB1 HIST2H3DP1-201ENST00000401004 416 ntBASIC15.23■□□□□ 0.03
NHLRC1Q6VVB1 RAB17-203ENST00000409576 466 ntTSL 3 BASIC15.23■□□□□ 0.03
NHLRC1Q6VVB1 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC15.23■□□□□ 0.03
NHLRC1Q6VVB1 AL450487.1-201ENST00000426799 995 ntBASIC15.23■□□□□ 0.03
NHLRC1Q6VVB1 AC079781.3-201ENST00000449110 356 ntBASIC15.23■□□□□ 0.03
NHLRC1Q6VVB1 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC15.23■□□□□ 0.03
NHLRC1Q6VVB1 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC15.23■□□□□ 0.03
NHLRC1Q6VVB1 KRT126P-201ENST00000549467 1181 ntBASIC15.23■□□□□ 0.03
NHLRC1Q6VVB1 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC15.23■□□□□ 0.03
NHLRC1Q6VVB1 SDCCAG3P1-201ENST00000589292 1150 ntBASIC15.23■□□□□ 0.03
NHLRC1Q6VVB1 IRF5-214ENST00000613821 595 ntTSL 5 BASIC15.23■□□□□ 0.03
NHLRC1Q6VVB1 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC15.23■□□□□ 0.03
NHLRC1Q6VVB1 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC15.23■□□□□ 0.03
NHLRC1Q6VVB1 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
NHLRC1Q6VVB1 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NHLRC1Q6VVB1 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
NHLRC1Q6VVB1 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
NHLRC1Q6VVB1 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
NHLRC1Q6VVB1 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NHLRC1Q6VVB1 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC15.23■□□□□ 0.03
NHLRC1Q6VVB1 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
NHLRC1Q6VVB1 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NHLRC1Q6VVB1 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC15.23■□□□□ 0.03
NHLRC1Q6VVB1 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
NHLRC1Q6VVB1 AC006504.4-201ENST00000592118 1568 ntBASIC15.23■□□□□ 0.03
NHLRC1Q6VVB1 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
NHLRC1Q6VVB1 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NHLRC1Q6VVB1 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
NHLRC1Q6VVB1 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
NHLRC1Q6VVB1 AC243591.1-201ENST00000452967 1364 ntBASIC15.23■□□□□ 0.03
NHLRC1Q6VVB1 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC15.23■□□□□ 0.03
NHLRC1Q6VVB1 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC15.23■□□□□ 0.03
NHLRC1Q6VVB1 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NHLRC1Q6VVB1 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
NHLRC1Q6VVB1 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC15.22■□□□□ 0.03
NHLRC1Q6VVB1 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
NHLRC1Q6VVB1 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC15.22■□□□□ 0.03
NHLRC1Q6VVB1 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
NHLRC1Q6VVB1 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
NHLRC1Q6VVB1 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC15.22■□□□□ 0.03
NHLRC1Q6VVB1 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NHLRC1Q6VVB1 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
NHLRC1Q6VVB1 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NHLRC1Q6VVB1 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NHLRC1Q6VVB1 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
NHLRC1Q6VVB1 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NHLRC1Q6VVB1 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
NHLRC1Q6VVB1 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NHLRC1Q6VVB1 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NHLRC1Q6VVB1 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NHLRC1Q6VVB1 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
NHLRC1Q6VVB1 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NHLRC1Q6VVB1 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NHLRC1Q6VVB1 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NHLRC1Q6VVB1 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
NHLRC1Q6VVB1 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC15.22■□□□□ 0.03
NHLRC1Q6VVB1 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC15.22■□□□□ 0.03
NHLRC1Q6VVB1 PTCHD3P3-201ENST00000403073 906 ntBASIC15.22■□□□□ 0.03
NHLRC1Q6VVB1 LAGE3P1-201ENST00000425356 484 ntBASIC15.22■□□□□ 0.03
NHLRC1Q6VVB1 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC15.22■□□□□ 0.03
NHLRC1Q6VVB1 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC15.22■□□□□ 0.03
NHLRC1Q6VVB1 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
NHLRC1Q6VVB1 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC15.22■□□□□ 0.03
NHLRC1Q6VVB1 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC15.22■□□□□ 0.03
NHLRC1Q6VVB1 MSRA-206ENST00000521209 814 ntTSL 3 BASIC15.22■□□□□ 0.03
NHLRC1Q6VVB1 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC15.22■□□□□ 0.03
NHLRC1Q6VVB1 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC15.22■□□□□ 0.03
NHLRC1Q6VVB1 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
NHLRC1Q6VVB1 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC15.22■□□□□ 0.03
NHLRC1Q6VVB1 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC15.22■□□□□ 0.03
NHLRC1Q6VVB1 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms