Protein–RNA interactions for Protein: Q5VV42

CDKAL1, Threonylcarbamoyladenosine tRNA methylthiotransferase, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1Q5VV42 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDKAL1Q5VV42 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDKAL1Q5VV42 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDKAL1Q5VV42 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDKAL1Q5VV42 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDKAL1Q5VV42 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC18.49■□□□□ 0.55
CDKAL1Q5VV42 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDKAL1Q5VV42 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC18.49■□□□□ 0.55
CDKAL1Q5VV42 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC18.49■□□□□ 0.55
CDKAL1Q5VV42 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC18.49■□□□□ 0.55
CDKAL1Q5VV42 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDKAL1Q5VV42 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDKAL1Q5VV42 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDKAL1Q5VV42 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDKAL1Q5VV42 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CDKAL1Q5VV42 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC18.49■□□□□ 0.55
CDKAL1Q5VV42 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDKAL1Q5VV42 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDKAL1Q5VV42 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDKAL1Q5VV42 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CDKAL1Q5VV42 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC18.49■□□□□ 0.55
CDKAL1Q5VV42 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC18.49■□□□□ 0.55
CDKAL1Q5VV42 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
CDKAL1Q5VV42 MPDU1-223ENST00000582151 728 ntBASIC18.49■□□□□ 0.55
CDKAL1Q5VV42 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC18.49■□□□□ 0.55
CDKAL1Q5VV42 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC18.49■□□□□ 0.55
CDKAL1Q5VV42 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC18.49■□□□□ 0.55
CDKAL1Q5VV42 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDKAL1Q5VV42 AL589182.2-201ENST00000619332 1049 ntBASIC18.49■□□□□ 0.55
CDKAL1Q5VV42 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC18.49■□□□□ 0.55
CDKAL1Q5VV42 REXO1L3P-201ENST00000622202 1288 ntBASIC18.49■□□□□ 0.55
CDKAL1Q5VV42 AL139288.1-201ENST00000623748 933 ntBASIC18.49■□□□□ 0.55
CDKAL1Q5VV42 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC18.49■□□□□ 0.55
CDKAL1Q5VV42 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC18.49■□□□□ 0.55
CDKAL1Q5VV42 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDKAL1Q5VV42 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
CDKAL1Q5VV42 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDKAL1Q5VV42 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CDKAL1Q5VV42 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDKAL1Q5VV42 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDKAL1Q5VV42 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDKAL1Q5VV42 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
CDKAL1Q5VV42 AC008894.3-201ENST00000624324 3103 ntBASIC18.49■□□□□ 0.55
CDKAL1Q5VV42 PGR-209ENST00000617858 2816 ntTSL 5 BASIC18.49■□□□□ 0.55
CDKAL1Q5VV42 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CDKAL1Q5VV42 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CDKAL1Q5VV42 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC18.49■□□□□ 0.55
CDKAL1Q5VV42 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CDKAL1Q5VV42 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDKAL1Q5VV42 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDKAL1Q5VV42 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC18.48■□□□□ 0.55
CDKAL1Q5VV42 AL031731.1-201ENST00000642131 2094 ntBASIC18.48■□□□□ 0.55
CDKAL1Q5VV42 AL596087.1-201ENST00000400979 1969 ntBASIC18.48■□□□□ 0.55
CDKAL1Q5VV42 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDKAL1Q5VV42 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDKAL1Q5VV42 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CDKAL1Q5VV42 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC18.48■□□□□ 0.55
CDKAL1Q5VV42 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDKAL1Q5VV42 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC18.48■□□□□ 0.55
CDKAL1Q5VV42 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC18.48■□□□□ 0.55
CDKAL1Q5VV42 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC18.48■□□□□ 0.55
CDKAL1Q5VV42 RBM17P3-201ENST00000417687 1192 ntBASIC18.48■□□□□ 0.55
CDKAL1Q5VV42 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC18.48■□□□□ 0.55
CDKAL1Q5VV42 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDKAL1Q5VV42 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC18.48■□□□□ 0.55
CDKAL1Q5VV42 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC18.48■□□□□ 0.55
CDKAL1Q5VV42 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC18.48■□□□□ 0.55
CDKAL1Q5VV42 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CDKAL1Q5VV42 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC18.48■□□□□ 0.55
CDKAL1Q5VV42 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDKAL1Q5VV42 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CDKAL1Q5VV42 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CDKAL1Q5VV42 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDKAL1Q5VV42 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
CDKAL1Q5VV42 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDKAL1Q5VV42 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CDKAL1Q5VV42 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC18.48■□□□□ 0.55
CDKAL1Q5VV42 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC18.48■□□□□ 0.55
CDKAL1Q5VV42 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDKAL1Q5VV42 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC18.47■□□□□ 0.55
CDKAL1Q5VV42 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CDKAL1Q5VV42 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC18.47■□□□□ 0.55
CDKAL1Q5VV42 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDKAL1Q5VV42 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDKAL1Q5VV42 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
CDKAL1Q5VV42 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CDKAL1Q5VV42 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
CDKAL1Q5VV42 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.47■□□□□ 0.55
CDKAL1Q5VV42 AC002310.6-201ENST00000624451 1377 ntBASIC18.47■□□□□ 0.55
CDKAL1Q5VV42 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CDKAL1Q5VV42 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDKAL1Q5VV42 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC18.47■□□□□ 0.55
CDKAL1Q5VV42 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDKAL1Q5VV42 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDKAL1Q5VV42 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CDKAL1Q5VV42 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC18.47■□□□□ 0.55
CDKAL1Q5VV42 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CDKAL1Q5VV42 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDKAL1Q5VV42 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC18.47■□□□□ 0.55
CDKAL1Q5VV42 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms