Protein–RNA interactions for Protein: Q53S08

RAB6C, Rab6C, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB6CQ53S08 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RAB6CQ53S08 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RAB6CQ53S08 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
RAB6CQ53S08 FAM185BP-201ENST00000443595 716 ntBASIC17.56■□□□□ 0.4
RAB6CQ53S08 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RAB6CQ53S08 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC17.56■□□□□ 0.4
RAB6CQ53S08 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC17.56■□□□□ 0.4
RAB6CQ53S08 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
RAB6CQ53S08 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC17.56■□□□□ 0.4
RAB6CQ53S08 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC17.56■□□□□ 0.4
RAB6CQ53S08 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
RAB6CQ53S08 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RAB6CQ53S08 AC010654.1-201ENST00000615722 808 ntBASIC17.56■□□□□ 0.4
RAB6CQ53S08 BX640515.1-201ENST00000617215 977 ntBASIC17.56■□□□□ 0.4
RAB6CQ53S08 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC17.56■□□□□ 0.4
RAB6CQ53S08 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC17.56■□□□□ 0.4
RAB6CQ53S08 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RAB6CQ53S08 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RAB6CQ53S08 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RAB6CQ53S08 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
RAB6CQ53S08 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RAB6CQ53S08 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RAB6CQ53S08 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RAB6CQ53S08 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
RAB6CQ53S08 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC17.56■□□□□ 0.4
RAB6CQ53S08 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RAB6CQ53S08 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RAB6CQ53S08 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RAB6CQ53S08 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC17.56■□□□□ 0.4
RAB6CQ53S08 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC17.55■□□□□ 0.4
RAB6CQ53S08 PCDHB19P-201ENST00000570871 2371 ntBASIC17.55■□□□□ 0.4
RAB6CQ53S08 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RAB6CQ53S08 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.55■□□□□ 0.4
RAB6CQ53S08 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC17.55■□□□□ 0.4
RAB6CQ53S08 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.55■□□□□ 0.4
RAB6CQ53S08 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RAB6CQ53S08 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.55■□□□□ 0.4
RAB6CQ53S08 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
RAB6CQ53S08 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RAB6CQ53S08 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RAB6CQ53S08 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
RAB6CQ53S08 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RAB6CQ53S08 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RAB6CQ53S08 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC17.55■□□□□ 0.4
RAB6CQ53S08 SLC4A1APP2-201ENST00000424054 1259 ntBASIC17.55■□□□□ 0.4
RAB6CQ53S08 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC17.55■□□□□ 0.4
RAB6CQ53S08 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
RAB6CQ53S08 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC17.55■□□□□ 0.4
RAB6CQ53S08 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC17.55■□□□□ 0.4
RAB6CQ53S08 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC17.55■□□□□ 0.4
RAB6CQ53S08 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC17.55■□□□□ 0.4
RAB6CQ53S08 AC018845.2-201ENST00000568326 409 ntBASIC17.55■□□□□ 0.4
RAB6CQ53S08 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC17.55■□□□□ 0.4
RAB6CQ53S08 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC17.55■□□□□ 0.4
RAB6CQ53S08 AC010507.1-201ENST00000633895 436 ntBASIC17.55■□□□□ 0.4
RAB6CQ53S08 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RAB6CQ53S08 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RAB6CQ53S08 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
RAB6CQ53S08 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RAB6CQ53S08 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.55■□□□□ 0.4
RAB6CQ53S08 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RAB6CQ53S08 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.55■□□□□ 0.4
RAB6CQ53S08 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RAB6CQ53S08 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RAB6CQ53S08 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
RAB6CQ53S08 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RAB6CQ53S08 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RAB6CQ53S08 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RAB6CQ53S08 AC131009.4-201ENST00000624048 1740 ntBASIC17.55■□□□□ 0.4
RAB6CQ53S08 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RAB6CQ53S08 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RAB6CQ53S08 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.54■□□□□ 0.4
RAB6CQ53S08 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
RAB6CQ53S08 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RAB6CQ53S08 AL118508.1-201ENST00000613502 2345 ntBASIC17.54■□□□□ 0.4
RAB6CQ53S08 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RAB6CQ53S08 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RAB6CQ53S08 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
RAB6CQ53S08 PRSS29P-201ENST00000440800 595 ntBASIC17.54■□□□□ 0.4
RAB6CQ53S08 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
RAB6CQ53S08 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC17.54■□□□□ 0.4
RAB6CQ53S08 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC17.54■□□□□ 0.4
RAB6CQ53S08 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RAB6CQ53S08 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
RAB6CQ53S08 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC17.54■□□□□ 0.4
RAB6CQ53S08 AC013467.2-201ENST00000605472 835 ntBASIC17.54■□□□□ 0.4
RAB6CQ53S08 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.54■□□□□ 0.4
RAB6CQ53S08 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.54■□□□□ 0.4
RAB6CQ53S08 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
RAB6CQ53S08 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RAB6CQ53S08 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
RAB6CQ53S08 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
RAB6CQ53S08 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RAB6CQ53S08 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RAB6CQ53S08 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.53■□□□□ 0.4
RAB6CQ53S08 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
RAB6CQ53S08 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RAB6CQ53S08 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RAB6CQ53S08 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC17.53■□□□□ 0.4
RAB6CQ53S08 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms