Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
CTC1Q2NKJ3 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.07■□□□□ 0.48
CTC1Q2NKJ3 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CTC1Q2NKJ3 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC18.07■□□□□ 0.48
CTC1Q2NKJ3 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC18.06■□□□□ 0.48
CTC1Q2NKJ3 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CTC1Q2NKJ3 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.06■□□□□ 0.48
CTC1Q2NKJ3 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CTC1Q2NKJ3 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
CTC1Q2NKJ3 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CTC1Q2NKJ3 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
CTC1Q2NKJ3 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CTC1Q2NKJ3 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CTC1Q2NKJ3 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CTC1Q2NKJ3 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
CTC1Q2NKJ3 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CTC1Q2NKJ3 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC18.06■□□□□ 0.48
CTC1Q2NKJ3 GOLGA6L11P-201ENST00000417252 1298 ntBASIC18.06■□□□□ 0.48
CTC1Q2NKJ3 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC18.06■□□□□ 0.48
CTC1Q2NKJ3 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC18.06■□□□□ 0.48
CTC1Q2NKJ3 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CTC1Q2NKJ3 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CTC1Q2NKJ3 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CTC1Q2NKJ3 AC026150.2-201ENST00000564693 1156 ntBASIC18.06■□□□□ 0.48
CTC1Q2NKJ3 AL358472.5-202ENST00000641448 1267 ntBASIC18.06■□□□□ 0.48
CTC1Q2NKJ3 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
CTC1Q2NKJ3 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC18.06■□□□□ 0.48
CTC1Q2NKJ3 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CTC1Q2NKJ3 HARS-203ENST00000431330 1774 ntTSL 2 BASIC18.06■□□□□ 0.48
CTC1Q2NKJ3 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC18.06■□□□□ 0.48
CTC1Q2NKJ3 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
CTC1Q2NKJ3 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
CTC1Q2NKJ3 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CTC1Q2NKJ3 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
CTC1Q2NKJ3 AP001094.4-201ENST00000579008 2176 ntBASIC18.06■□□□□ 0.48
CTC1Q2NKJ3 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CTC1Q2NKJ3 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CTC1Q2NKJ3 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CTC1Q2NKJ3 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CTC1Q2NKJ3 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
CTC1Q2NKJ3 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CTC1Q2NKJ3 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CTC1Q2NKJ3 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CTC1Q2NKJ3 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CTC1Q2NKJ3 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CTC1Q2NKJ3 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CTC1Q2NKJ3 AL096828.2-201ENST00000567259 1965 ntBASIC18.05■□□□□ 0.48
CTC1Q2NKJ3 HLA-V-201ENST00000429037 534 ntBASIC18.05■□□□□ 0.48
CTC1Q2NKJ3 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CTC1Q2NKJ3 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC18.05■□□□□ 0.48
CTC1Q2NKJ3 SPDYE14P-201ENST00000442619 822 ntBASIC18.05■□□□□ 0.48
CTC1Q2NKJ3 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC18.05■□□□□ 0.48
CTC1Q2NKJ3 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC18.05■□□□□ 0.48
CTC1Q2NKJ3 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC18.05■□□□□ 0.48
CTC1Q2NKJ3 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
CTC1Q2NKJ3 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC18.05■□□□□ 0.48
CTC1Q2NKJ3 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC18.05■□□□□ 0.48
CTC1Q2NKJ3 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
CTC1Q2NKJ3 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC18.05■□□□□ 0.48
CTC1Q2NKJ3 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
CTC1Q2NKJ3 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CTC1Q2NKJ3 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
CTC1Q2NKJ3 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CTC1Q2NKJ3 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CTC1Q2NKJ3 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC18.05■□□□□ 0.48
CTC1Q2NKJ3 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CTC1Q2NKJ3 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CTC1Q2NKJ3 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CTC1Q2NKJ3 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CTC1Q2NKJ3 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CTC1Q2NKJ3 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
CTC1Q2NKJ3 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CTC1Q2NKJ3 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CTC1Q2NKJ3 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
CTC1Q2NKJ3 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CTC1Q2NKJ3 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CTC1Q2NKJ3 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC18.04■□□□□ 0.48
CTC1Q2NKJ3 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC18.04■□□□□ 0.48
CTC1Q2NKJ3 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CTC1Q2NKJ3 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CTC1Q2NKJ3 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CTC1Q2NKJ3 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
CTC1Q2NKJ3 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CTC1Q2NKJ3 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CTC1Q2NKJ3 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CTC1Q2NKJ3 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
CTC1Q2NKJ3 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CTC1Q2NKJ3 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC18.04■□□□□ 0.48
CTC1Q2NKJ3 AL359881.2-201ENST00000602973 570 ntBASIC18.04■□□□□ 0.48
CTC1Q2NKJ3 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC18.04■□□□□ 0.48
CTC1Q2NKJ3 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CTC1Q2NKJ3 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC18.04■□□□□ 0.48
CTC1Q2NKJ3 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CTC1Q2NKJ3 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC18.04■□□□□ 0.48
CTC1Q2NKJ3 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CTC1Q2NKJ3 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC18.04■□□□□ 0.48
CTC1Q2NKJ3 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
CTC1Q2NKJ3 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CTC1Q2NKJ3 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CTC1Q2NKJ3 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms