Protein–RNA interactions for Protein: Q2M329

CCDC96, Coiled-coil domain-containing protein 96, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC96Q2M329 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC96Q2M329 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC96Q2M329 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC19.68■□□□□ 0.74
CCDC96Q2M329 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC19.68■□□□□ 0.74
CCDC96Q2M329 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC96Q2M329 PUS1-205ENST00000535067 838 ntTSL 3 BASIC19.68■□□□□ 0.74
CCDC96Q2M329 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC19.68■□□□□ 0.74
CCDC96Q2M329 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC19.68■□□□□ 0.74
CCDC96Q2M329 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC19.68■□□□□ 0.74
CCDC96Q2M329 SNHG9-202ENST00000564014 471 ntBASIC19.68■□□□□ 0.74
CCDC96Q2M329 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC19.68■□□□□ 0.74
CCDC96Q2M329 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC19.68■□□□□ 0.74
CCDC96Q2M329 CITED2-204ENST00000618718 901 ntTSL 2 BASIC19.68■□□□□ 0.74
CCDC96Q2M329 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
CCDC96Q2M329 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC19.68■□□□□ 0.74
CCDC96Q2M329 AL023806.1-201ENST00000603994 1649 ntBASIC19.68■□□□□ 0.74
CCDC96Q2M329 RHBDF1P1-201ENST00000427504 1941 ntBASIC19.68■□□□□ 0.74
CCDC96Q2M329 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC96Q2M329 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC96Q2M329 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
CCDC96Q2M329 TOP3BP1-201ENST00000420768 1380 ntBASIC19.68■□□□□ 0.74
CCDC96Q2M329 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC96Q2M329 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC96Q2M329 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC96Q2M329 AL353732.1-201ENST00000569618 1459 ntBASIC19.67■□□□□ 0.74
CCDC96Q2M329 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC96Q2M329 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC19.67■□□□□ 0.74
CCDC96Q2M329 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC96Q2M329 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC96Q2M329 AC012569.1-201ENST00000591191 1524 ntBASIC19.67■□□□□ 0.74
CCDC96Q2M329 AC092053.1-201ENST00000605787 1936 ntBASIC19.67■□□□□ 0.74
CCDC96Q2M329 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC96Q2M329 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC19.67■□□□□ 0.74
CCDC96Q2M329 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC96Q2M329 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC19.67■□□□□ 0.74
CCDC96Q2M329 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC19.67■□□□□ 0.74
CCDC96Q2M329 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC19.67■□□□□ 0.74
CCDC96Q2M329 AC112191.1-201ENST00000523689 701 ntBASIC19.67■□□□□ 0.74
CCDC96Q2M329 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC19.67■□□□□ 0.74
CCDC96Q2M329 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC19.67■□□□□ 0.74
CCDC96Q2M329 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC19.67■□□□□ 0.74
CCDC96Q2M329 DUX4L17-201ENST00000557360 1267 ntBASIC19.67■□□□□ 0.74
CCDC96Q2M329 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC19.67■□□□□ 0.74
CCDC96Q2M329 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC19.67■□□□□ 0.74
CCDC96Q2M329 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC96Q2M329 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC96Q2M329 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC96Q2M329 AL021920.2-201ENST00000624828 1351 ntBASIC19.67■□□□□ 0.74
CCDC96Q2M329 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC96Q2M329 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC19.67■□□□□ 0.74
CCDC96Q2M329 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC96Q2M329 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC96Q2M329 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CCDC96Q2M329 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CCDC96Q2M329 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC96Q2M329 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC96Q2M329 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC19.66■□□□□ 0.74
CCDC96Q2M329 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CCDC96Q2M329 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC96Q2M329 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC96Q2M329 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC19.66■□□□□ 0.74
CCDC96Q2M329 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC96Q2M329 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC96Q2M329 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC96Q2M329 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC96Q2M329 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC96Q2M329 URGCP-206ENST00000446958 365 ntTSL 2 BASIC19.66■□□□□ 0.74
CCDC96Q2M329 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC19.66■□□□□ 0.74
CCDC96Q2M329 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC19.66■□□□□ 0.74
CCDC96Q2M329 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CCDC96Q2M329 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
CCDC96Q2M329 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC19.66■□□□□ 0.74
CCDC96Q2M329 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
CCDC96Q2M329 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC96Q2M329 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC96Q2M329 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC96Q2M329 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC19.66■□□□□ 0.74
CCDC96Q2M329 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC19.66■□□□□ 0.74
CCDC96Q2M329 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
CCDC96Q2M329 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
CCDC96Q2M329 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CCDC96Q2M329 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CCDC96Q2M329 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
CCDC96Q2M329 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CCDC96Q2M329 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC19.65■□□□□ 0.74
CCDC96Q2M329 CEP83-AS1-201ENST00000623122 2482 ntBASIC19.65■□□□□ 0.74
CCDC96Q2M329 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC96Q2M329 HARS-204ENST00000438307 1789 ntTSL 2 BASIC19.65■□□□□ 0.74
CCDC96Q2M329 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CCDC96Q2M329 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC96Q2M329 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
CCDC96Q2M329 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
CCDC96Q2M329 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC96Q2M329 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC19.65■□□□□ 0.74
CCDC96Q2M329 HMGA1P7-201ENST00000406908 502 ntBASIC19.65■□□□□ 0.74
CCDC96Q2M329 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC19.65■□□□□ 0.74
CCDC96Q2M329 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC96Q2M329 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC96Q2M329 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC19.65■□□□□ 0.74
CCDC96Q2M329 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms