Protein–RNA interactions for Protein: Q0VFZ6

CCDC173, Coiled-coil domain-containing protein 173, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC173Q0VFZ6 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC19.21■□□□□ 0.67
CCDC173Q0VFZ6 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
CCDC173Q0VFZ6 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
CCDC173Q0VFZ6 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
CCDC173Q0VFZ6 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC173Q0VFZ6 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC19.21■□□□□ 0.67
CCDC173Q0VFZ6 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC173Q0VFZ6 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
CCDC173Q0VFZ6 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC19.21■□□□□ 0.67
CCDC173Q0VFZ6 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC173Q0VFZ6 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC173Q0VFZ6 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC19.21■□□□□ 0.67
CCDC173Q0VFZ6 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC173Q0VFZ6 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC173Q0VFZ6 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC173Q0VFZ6 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC173Q0VFZ6 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC173Q0VFZ6 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC19.2■□□□□ 0.66
CCDC173Q0VFZ6 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC19.2■□□□□ 0.66
CCDC173Q0VFZ6 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC19.2■□□□□ 0.66
CCDC173Q0VFZ6 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC173Q0VFZ6 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC173Q0VFZ6 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC19.2■□□□□ 0.66
CCDC173Q0VFZ6 GRAP-204ENST00000573099 846 ntTSL 3 BASIC19.2■□□□□ 0.66
CCDC173Q0VFZ6 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.2■□□□□ 0.66
CCDC173Q0VFZ6 RPS15-203ENST00000586096 570 ntTSL 2 BASIC19.2■□□□□ 0.66
CCDC173Q0VFZ6 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC19.2■□□□□ 0.66
CCDC173Q0VFZ6 CR769767.2-201ENST00000622735 460 ntBASIC19.2■□□□□ 0.66
CCDC173Q0VFZ6 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC173Q0VFZ6 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC173Q0VFZ6 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC173Q0VFZ6 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC173Q0VFZ6 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
CCDC173Q0VFZ6 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC19.2■□□□□ 0.66
CCDC173Q0VFZ6 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC19.19■□□□□ 0.66
CCDC173Q0VFZ6 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CCDC173Q0VFZ6 AP005117.1-202ENST00000581724 1908 ntBASIC19.19■□□□□ 0.66
CCDC173Q0VFZ6 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC19.19■□□□□ 0.66
CCDC173Q0VFZ6 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC19.19■□□□□ 0.66
CCDC173Q0VFZ6 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
CCDC173Q0VFZ6 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC173Q0VFZ6 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC173Q0VFZ6 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC173Q0VFZ6 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CCDC173Q0VFZ6 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC19.19■□□□□ 0.66
CCDC173Q0VFZ6 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC173Q0VFZ6 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC19.19■□□□□ 0.66
CCDC173Q0VFZ6 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC19.19■□□□□ 0.66
CCDC173Q0VFZ6 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC173Q0VFZ6 AC005521.1-201ENST00000393351 872 ntBASIC19.19■□□□□ 0.66
CCDC173Q0VFZ6 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC19.19■□□□□ 0.66
CCDC173Q0VFZ6 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC19.19■□□□□ 0.66
CCDC173Q0VFZ6 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC19.19■□□□□ 0.66
CCDC173Q0VFZ6 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC173Q0VFZ6 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC173Q0VFZ6 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CCDC173Q0VFZ6 AMT-206ENST00000458307 1860 ntTSL 2 BASIC19.19■□□□□ 0.66
CCDC173Q0VFZ6 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC173Q0VFZ6 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
CCDC173Q0VFZ6 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC173Q0VFZ6 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
CCDC173Q0VFZ6 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC173Q0VFZ6 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC173Q0VFZ6 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC173Q0VFZ6 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC173Q0VFZ6 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC173Q0VFZ6 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC173Q0VFZ6 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC19.19■□□□□ 0.66
CCDC173Q0VFZ6 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC173Q0VFZ6 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC173Q0VFZ6 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC173Q0VFZ6 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC19.18■□□□□ 0.66
CCDC173Q0VFZ6 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC173Q0VFZ6 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC173Q0VFZ6 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC173Q0VFZ6 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC173Q0VFZ6 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC19.18■□□□□ 0.66
CCDC173Q0VFZ6 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC173Q0VFZ6 MFAP1P1-201ENST00000442257 1255 ntBASIC19.18■□□□□ 0.66
CCDC173Q0VFZ6 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC19.18■□□□□ 0.66
CCDC173Q0VFZ6 KRT18P57-201ENST00000443599 1254 ntBASIC19.18■□□□□ 0.66
CCDC173Q0VFZ6 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC173Q0VFZ6 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC19.18■□□□□ 0.66
CCDC173Q0VFZ6 AC113404.2-201ENST00000507884 177 ntBASIC19.18■□□□□ 0.66
CCDC173Q0VFZ6 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC19.18■□□□□ 0.66
CCDC173Q0VFZ6 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC19.18■□□□□ 0.66
CCDC173Q0VFZ6 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC19.18■□□□□ 0.66
CCDC173Q0VFZ6 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC173Q0VFZ6 FRMD8P1-201ENST00000440433 1524 ntBASIC19.18■□□□□ 0.66
CCDC173Q0VFZ6 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC173Q0VFZ6 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC173Q0VFZ6 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC173Q0VFZ6 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC173Q0VFZ6 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC173Q0VFZ6 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC19.18■□□□□ 0.66
CCDC173Q0VFZ6 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CCDC173Q0VFZ6 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC173Q0VFZ6 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
CCDC173Q0VFZ6 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC19.17■□□□□ 0.66
CCDC173Q0VFZ6 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms