Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC14.89□□□□□ -0.03
SEC61A1P61619 TPM1-218ENST00000559281 851 ntTSL 5 BASIC14.89□□□□□ -0.03
SEC61A1P61619 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC14.89□□□□□ -0.03
SEC61A1P61619 LINC01711-201ENST00000598340 967 ntBASIC14.89□□□□□ -0.03
SEC61A1P61619 IGHV3OR16-7-201ENST00000604106 360 ntBASIC14.89□□□□□ -0.03
SEC61A1P61619 AL031008.1-201ENST00000619963 541 ntBASIC14.89□□□□□ -0.03
SEC61A1P61619 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SEC61A1P61619 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
SEC61A1P61619 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
SEC61A1P61619 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
SEC61A1P61619 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SEC61A1P61619 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC14.89□□□□□ -0.03
SEC61A1P61619 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC14.89□□□□□ -0.03
SEC61A1P61619 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
SEC61A1P61619 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SEC61A1P61619 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SEC61A1P61619 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SEC61A1P61619 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SEC61A1P61619 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
SEC61A1P61619 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC14.89□□□□□ -0.03
SEC61A1P61619 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC14.89□□□□□ -0.03
SEC61A1P61619 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
SEC61A1P61619 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC14.89□□□□□ -0.03
SEC61A1P61619 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SEC61A1P61619 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC14.88□□□□□ -0.03
SEC61A1P61619 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
SEC61A1P61619 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
SEC61A1P61619 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SEC61A1P61619 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC14.88□□□□□ -0.03
SEC61A1P61619 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SEC61A1P61619 AC105917.1-201ENST00000506637 2539 ntBASIC14.88□□□□□ -0.03
SEC61A1P61619 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SEC61A1P61619 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SEC61A1P61619 AC009949.1-201ENST00000623048 1830 ntBASIC14.88□□□□□ -0.03
SEC61A1P61619 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC14.88□□□□□ -0.03
SEC61A1P61619 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
SEC61A1P61619 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC14.88□□□□□ -0.03
SEC61A1P61619 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SEC61A1P61619 LSM5-204ENST00000409909 740 ntTSL 2 BASIC14.88□□□□□ -0.03
SEC61A1P61619 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC14.88□□□□□ -0.03
SEC61A1P61619 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC14.88□□□□□ -0.03
SEC61A1P61619 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC14.88□□□□□ -0.03
SEC61A1P61619 MEG3-211ENST00000452514 461 ntTSL 3 BASIC14.88□□□□□ -0.03
SEC61A1P61619 KRT16P4-201ENST00000453883 522 ntBASIC14.88□□□□□ -0.03
SEC61A1P61619 AL138831.2-201ENST00000606564 490 ntBASIC14.88□□□□□ -0.03
SEC61A1P61619 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
SEC61A1P61619 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC14.88□□□□□ -0.03
SEC61A1P61619 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SEC61A1P61619 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SEC61A1P61619 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SEC61A1P61619 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
SEC61A1P61619 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC14.88□□□□□ -0.03
SEC61A1P61619 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SEC61A1P61619 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SEC61A1P61619 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC14.88□□□□□ -0.03
SEC61A1P61619 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
SEC61A1P61619 TP73-AS1-210ENST00000637775 1455 ntBASIC14.88□□□□□ -0.03
SEC61A1P61619 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SEC61A1P61619 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SEC61A1P61619 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
SEC61A1P61619 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
SEC61A1P61619 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC14.88□□□□□ -0.03
SEC61A1P61619 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SEC61A1P61619 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
SEC61A1P61619 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SEC61A1P61619 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SEC61A1P61619 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
SEC61A1P61619 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SEC61A1P61619 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC14.87□□□□□ -0.03
SEC61A1P61619 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SEC61A1P61619 AC060834.1-201ENST00000443027 2032 ntBASIC14.87□□□□□ -0.03
SEC61A1P61619 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
SEC61A1P61619 AC023824.1-201ENST00000562945 2975 ntBASIC14.87□□□□□ -0.03
SEC61A1P61619 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
SEC61A1P61619 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
SEC61A1P61619 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC14.87□□□□□ -0.03
SEC61A1P61619 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SEC61A1P61619 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SEC61A1P61619 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SEC61A1P61619 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SEC61A1P61619 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SEC61A1P61619 RCN1P2-201ENST00000398357 915 ntBASIC14.87□□□□□ -0.03
SEC61A1P61619 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
SEC61A1P61619 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC14.87□□□□□ -0.03
SEC61A1P61619 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC14.87□□□□□ -0.03
SEC61A1P61619 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC14.87□□□□□ -0.03
SEC61A1P61619 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC14.87□□□□□ -0.03
SEC61A1P61619 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
SEC61A1P61619 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC14.87□□□□□ -0.03
SEC61A1P61619 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC14.87□□□□□ -0.03
SEC61A1P61619 KLK8-205ENST00000593490 267 ntTSL 3 BASIC14.87□□□□□ -0.03
SEC61A1P61619 AC114341.1-201ENST00000618070 349 ntBASIC14.87□□□□□ -0.03
SEC61A1P61619 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
SEC61A1P61619 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
SEC61A1P61619 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
SEC61A1P61619 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
SEC61A1P61619 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SEC61A1P61619 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
SEC61A1P61619 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
SEC61A1P61619 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms