Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
CDH11P55287 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDH11P55287 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC15.56■□□□□ 0.08
CDH11P55287 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDH11P55287 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
CDH11P55287 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDH11P55287 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
CDH11P55287 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CDH11P55287 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDH11P55287 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
CDH11P55287 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC15.56■□□□□ 0.08
CDH11P55287 PON3-205ENST00000451904 1053 ntTSL 3 BASIC15.56■□□□□ 0.08
CDH11P55287 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC15.56■□□□□ 0.08
CDH11P55287 BMF-207ENST00000559701 630 ntTSL 3 BASIC15.56■□□□□ 0.08
CDH11P55287 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CDH11P55287 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC15.56■□□□□ 0.08
CDH11P55287 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC15.56■□□□□ 0.08
CDH11P55287 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CDH11P55287 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC15.56■□□□□ 0.08
CDH11P55287 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC15.56■□□□□ 0.08
CDH11P55287 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
CDH11P55287 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
CDH11P55287 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC15.56■□□□□ 0.08
CDH11P55287 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDH11P55287 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC15.56■□□□□ 0.08
CDH11P55287 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.56■□□□□ 0.08
CDH11P55287 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CDH11P55287 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDH11P55287 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CDH11P55287 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CDH11P55287 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC15.56■□□□□ 0.08
CDH11P55287 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDH11P55287 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDH11P55287 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CDH11P55287 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC15.56■□□□□ 0.08
CDH11P55287 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDH11P55287 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDH11P55287 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDH11P55287 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDH11P55287 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
CDH11P55287 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDH11P55287 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDH11P55287 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDH11P55287 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDH11P55287 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC15.55■□□□□ 0.08
CDH11P55287 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC15.55■□□□□ 0.08
CDH11P55287 AC026691.1-201ENST00000602502 2017 ntBASIC15.55■□□□□ 0.08
CDH11P55287 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDH11P55287 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDH11P55287 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDH11P55287 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
CDH11P55287 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDH11P55287 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
CDH11P55287 EGFEM1P-202ENST00000431685 1563 ntBASIC15.55■□□□□ 0.08
CDH11P55287 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDH11P55287 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
CDH11P55287 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDH11P55287 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC15.55■□□□□ 0.08
CDH11P55287 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC15.55■□□□□ 0.08
CDH11P55287 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CDH11P55287 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CDH11P55287 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDH11P55287 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CDH11P55287 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDH11P55287 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC15.55■□□□□ 0.08
CDH11P55287 POM121L3P-201ENST00000419331 1163 ntBASIC15.55■□□□□ 0.08
CDH11P55287 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC15.55■□□□□ 0.08
CDH11P55287 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC15.55■□□□□ 0.08
CDH11P55287 AC079781.3-201ENST00000449110 356 ntBASIC15.55■□□□□ 0.08
CDH11P55287 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC15.55■□□□□ 0.08
CDH11P55287 SAPCD2P3-201ENST00000455031 850 ntBASIC15.55■□□□□ 0.08
CDH11P55287 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC15.55■□□□□ 0.08
CDH11P55287 AC109462.3-201ENST00000573934 613 ntBASIC15.55■□□□□ 0.08
CDH11P55287 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
CDH11P55287 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDH11P55287 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDH11P55287 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDH11P55287 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDH11P55287 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC15.55■□□□□ 0.08
CDH11P55287 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDH11P55287 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC15.55■□□□□ 0.08
CDH11P55287 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC15.55■□□□□ 0.08
CDH11P55287 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CDH11P55287 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CDH11P55287 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC15.55■□□□□ 0.08
CDH11P55287 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDH11P55287 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC15.55■□□□□ 0.08
CDH11P55287 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CDH11P55287 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CDH11P55287 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC15.54■□□□□ 0.08
CDH11P55287 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDH11P55287 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CDH11P55287 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC15.54■□□□□ 0.08
CDH11P55287 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC15.54■□□□□ 0.08
CDH11P55287 ACE-204ENST00000428043 5120 ntTSL 2 BASIC15.54■□□□□ 0.08
CDH11P55287 AL162727.3-201ENST00000635661 2787 ntBASIC15.54■□□□□ 0.08
CDH11P55287 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
CDH11P55287 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC15.54■□□□□ 0.08
CDH11P55287 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDH11P55287 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms