Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HMGCS2P54868 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
HMGCS2P54868 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC19.39■□□□□ 0.69
HMGCS2P54868 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.39■□□□□ 0.69
HMGCS2P54868 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC19.39■□□□□ 0.69
HMGCS2P54868 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
HMGCS2P54868 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
HMGCS2P54868 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HMGCS2P54868 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
HMGCS2P54868 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HMGCS2P54868 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HMGCS2P54868 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HMGCS2P54868 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HMGCS2P54868 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
HMGCS2P54868 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
HMGCS2P54868 PP14571-201ENST00000404327 934 ntTSL 2 BASIC19.38■□□□□ 0.69
HMGCS2P54868 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC19.38■□□□□ 0.69
HMGCS2P54868 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HMGCS2P54868 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
HMGCS2P54868 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC19.38■□□□□ 0.69
HMGCS2P54868 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC19.38■□□□□ 0.69
HMGCS2P54868 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC19.38■□□□□ 0.69
HMGCS2P54868 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC19.38■□□□□ 0.69
HMGCS2P54868 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC19.38■□□□□ 0.69
HMGCS2P54868 AC108860.2-201ENST00000562760 2183 ntBASIC19.38■□□□□ 0.69
HMGCS2P54868 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC19.38■□□□□ 0.69
HMGCS2P54868 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HMGCS2P54868 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HMGCS2P54868 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC19.38■□□□□ 0.69
HMGCS2P54868 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
HMGCS2P54868 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
HMGCS2P54868 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.38■□□□□ 0.69
HMGCS2P54868 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HMGCS2P54868 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HMGCS2P54868 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HMGCS2P54868 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
HMGCS2P54868 NOC2LP1-202ENST00000452600 2235 ntBASIC19.37■□□□□ 0.69
HMGCS2P54868 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
HMGCS2P54868 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HMGCS2P54868 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HMGCS2P54868 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC19.37■□□□□ 0.69
HMGCS2P54868 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HMGCS2P54868 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HMGCS2P54868 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HMGCS2P54868 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HMGCS2P54868 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
HMGCS2P54868 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC19.37■□□□□ 0.69
HMGCS2P54868 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC19.37■□□□□ 0.69
HMGCS2P54868 NEFHP1-201ENST00000412845 2629 ntBASIC19.37■□□□□ 0.69
HMGCS2P54868 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
HMGCS2P54868 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HMGCS2P54868 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HMGCS2P54868 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HMGCS2P54868 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HMGCS2P54868 HNRNPA3P1-201ENST00000401429 1139 ntBASIC19.37■□□□□ 0.69
HMGCS2P54868 HNRNPA3P5-201ENST00000455201 833 ntBASIC19.37■□□□□ 0.69
HMGCS2P54868 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC19.37■□□□□ 0.69
HMGCS2P54868 SATB1-217ENST00000493952 626 ntTSL 3 BASIC19.37■□□□□ 0.69
HMGCS2P54868 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC19.37■□□□□ 0.69
HMGCS2P54868 COQ9-214ENST00000567933 882 ntTSL 3 BASIC19.37■□□□□ 0.69
HMGCS2P54868 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC19.37■□□□□ 0.69
HMGCS2P54868 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HMGCS2P54868 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
HMGCS2P54868 BOC-212ENST00000485230 2173 ntTSL 2 BASIC19.37■□□□□ 0.69
HMGCS2P54868 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
HMGCS2P54868 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HMGCS2P54868 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HMGCS2P54868 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HMGCS2P54868 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC19.37■□□□□ 0.69
HMGCS2P54868 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
HMGCS2P54868 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
HMGCS2P54868 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
HMGCS2P54868 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC19.37■□□□□ 0.69
HMGCS2P54868 AC022144.1-201ENST00000602255 1580 ntBASIC19.36■□□□□ 0.69
HMGCS2P54868 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC19.36■□□□□ 0.69
HMGCS2P54868 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HMGCS2P54868 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HMGCS2P54868 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HMGCS2P54868 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC19.36■□□□□ 0.69
HMGCS2P54868 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC19.36■□□□□ 0.69
HMGCS2P54868 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC19.36■□□□□ 0.69
HMGCS2P54868 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC19.36■□□□□ 0.69
HMGCS2P54868 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC19.36■□□□□ 0.69
HMGCS2P54868 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC19.36■□□□□ 0.69
HMGCS2P54868 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC19.36■□□□□ 0.69
HMGCS2P54868 PRYP6-201ENST00000514804 343 ntBASIC19.36■□□□□ 0.69
HMGCS2P54868 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC19.36■□□□□ 0.69
HMGCS2P54868 AC009118.2-201ENST00000613275 655 ntBASIC19.36■□□□□ 0.69
HMGCS2P54868 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC19.36■□□□□ 0.69
HMGCS2P54868 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HMGCS2P54868 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC19.36■□□□□ 0.69
HMGCS2P54868 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC19.36■□□□□ 0.69
HMGCS2P54868 GRAMD4P3-201ENST00000621665 1669 ntBASIC19.36■□□□□ 0.69
HMGCS2P54868 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC19.36■□□□□ 0.69
HMGCS2P54868 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HMGCS2P54868 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HMGCS2P54868 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC19.36■□□□□ 0.69
HMGCS2P54868 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HMGCS2P54868 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HMGCS2P54868 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms