Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CACNA2D1P54289 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CACNA2D1P54289 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17.93■□□□□ 0.46
CACNA2D1P54289 AC092919.2-201ENST00000623631 1645 ntBASIC17.93■□□□□ 0.46
CACNA2D1P54289 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.93■□□□□ 0.46
CACNA2D1P54289 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CACNA2D1P54289 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CACNA2D1P54289 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC17.93■□□□□ 0.46
CACNA2D1P54289 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CACNA2D1P54289 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CACNA2D1P54289 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CACNA2D1P54289 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CACNA2D1P54289 AC092068.3-201ENST00000587894 2016 ntBASIC17.93■□□□□ 0.46
CACNA2D1P54289 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.92■□□□□ 0.46
CACNA2D1P54289 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CACNA2D1P54289 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CACNA2D1P54289 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CACNA2D1P54289 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CACNA2D1P54289 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CACNA2D1P54289 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CACNA2D1P54289 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC17.92■□□□□ 0.46
CACNA2D1P54289 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CACNA2D1P54289 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CACNA2D1P54289 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CACNA2D1P54289 MIR1233-2-201ENST00000408138 82 ntBASIC17.92■□□□□ 0.46
CACNA2D1P54289 MIR1233-1-201ENST00000408722 82 ntBASIC17.92■□□□□ 0.46
CACNA2D1P54289 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC17.92■□□□□ 0.46
CACNA2D1P54289 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC17.92■□□□□ 0.46
CACNA2D1P54289 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC17.92■□□□□ 0.46
CACNA2D1P54289 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.92■□□□□ 0.46
CACNA2D1P54289 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC17.92■□□□□ 0.46
CACNA2D1P54289 MMP17-203ENST00000535004 719 ntTSL 3 BASIC17.92■□□□□ 0.46
CACNA2D1P54289 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC17.92■□□□□ 0.46
CACNA2D1P54289 AC023141.13-201ENST00000604991 943 ntBASIC17.92■□□□□ 0.46
CACNA2D1P54289 GPALPP1-207ENST00000611650 899 ntBASIC17.92■□□□□ 0.46
CACNA2D1P54289 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
CACNA2D1P54289 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CACNA2D1P54289 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CACNA2D1P54289 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CACNA2D1P54289 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CACNA2D1P54289 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC17.92■□□□□ 0.46
CACNA2D1P54289 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CACNA2D1P54289 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CACNA2D1P54289 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CACNA2D1P54289 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CACNA2D1P54289 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CACNA2D1P54289 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.91■□□□□ 0.46
CACNA2D1P54289 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CACNA2D1P54289 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.91■□□□□ 0.46
CACNA2D1P54289 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CACNA2D1P54289 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CACNA2D1P54289 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CACNA2D1P54289 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
CACNA2D1P54289 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CACNA2D1P54289 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CACNA2D1P54289 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CACNA2D1P54289 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CACNA2D1P54289 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CACNA2D1P54289 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
CACNA2D1P54289 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CACNA2D1P54289 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CACNA2D1P54289 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CACNA2D1P54289 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC17.91■□□□□ 0.46
CACNA2D1P54289 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CACNA2D1P54289 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC17.91■□□□□ 0.46
CACNA2D1P54289 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC17.91■□□□□ 0.46
CACNA2D1P54289 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC17.91■□□□□ 0.46
CACNA2D1P54289 MTDHP5-201ENST00000598980 586 ntBASIC17.91■□□□□ 0.46
CACNA2D1P54289 AL078644.1-201ENST00000609881 752 ntBASIC17.91■□□□□ 0.46
CACNA2D1P54289 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC17.91■□□□□ 0.46
CACNA2D1P54289 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.91■□□□□ 0.46
CACNA2D1P54289 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CACNA2D1P54289 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CACNA2D1P54289 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.91■□□□□ 0.46
CACNA2D1P54289 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC17.91■□□□□ 0.46
CACNA2D1P54289 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CACNA2D1P54289 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CACNA2D1P54289 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CACNA2D1P54289 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CACNA2D1P54289 HARS-203ENST00000431330 1774 ntTSL 2 BASIC17.91■□□□□ 0.46
CACNA2D1P54289 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.91■□□□□ 0.46
CACNA2D1P54289 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CACNA2D1P54289 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CACNA2D1P54289 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CACNA2D1P54289 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CACNA2D1P54289 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CACNA2D1P54289 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CACNA2D1P54289 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC17.9■□□□□ 0.46
CACNA2D1P54289 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17.9■□□□□ 0.46
CACNA2D1P54289 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CACNA2D1P54289 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CACNA2D1P54289 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.9■□□□□ 0.46
CACNA2D1P54289 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.9■□□□□ 0.46
CACNA2D1P54289 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CACNA2D1P54289 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CACNA2D1P54289 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.9■□□□□ 0.46
CACNA2D1P54289 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CACNA2D1P54289 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CACNA2D1P54289 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
CACNA2D1P54289 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms