Protein–RNA interactions for Protein: P54259

ATN1, Atrophin-1, humanhuman

Predicted RBP Predictions only

Length 1,190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1P54259 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
ATN1P54259 AC079776.1-201ENST00000401540 1152 ntBASIC18.54■□□□□ 0.56
ATN1P54259 RPL37AP1-201ENST00000412502 279 ntBASIC18.54■□□□□ 0.56
ATN1P54259 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC18.54■□□□□ 0.56
ATN1P54259 AC112492.5-201ENST00000421897 457 ntBASIC18.54■□□□□ 0.56
ATN1P54259 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ATN1P54259 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC18.54■□□□□ 0.56
ATN1P54259 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC18.54■□□□□ 0.56
ATN1P54259 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC18.54■□□□□ 0.56
ATN1P54259 AC005954.1-201ENST00000591962 337 ntTSL 3 BASIC18.54■□□□□ 0.56
ATN1P54259 AL606495.2-201ENST00000605867 535 ntBASIC18.54■□□□□ 0.56
ATN1P54259 Six3os1_5.1-201ENST00000611000 271 ntBASIC18.54■□□□□ 0.56
ATN1P54259 MIR6805-201ENST00000615055 62 ntBASIC18.54■□□□□ 0.56
ATN1P54259 CBR3-AS1-213ENST00000623647 815 ntTSL 5 BASIC18.54■□□□□ 0.56
ATN1P54259 AP001350.2-201ENST00000625104 1094 ntBASIC18.54■□□□□ 0.56
ATN1P54259 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ATN1P54259 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC18.54■□□□□ 0.56
ATN1P54259 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.54■□□□□ 0.56
ATN1P54259 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ATN1P54259 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ATN1P54259 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
ATN1P54259 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
ATN1P54259 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ATN1P54259 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ATN1P54259 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ATN1P54259 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ATN1P54259 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ATN1P54259 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
ATN1P54259 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ATN1P54259 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.53■□□□□ 0.56
ATN1P54259 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
ATN1P54259 HIKESHI-201ENST00000278483 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ATN1P54259 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
ATN1P54259 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ATN1P54259 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
ATN1P54259 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC18.53■□□□□ 0.56
ATN1P54259 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
ATN1P54259 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC18.53■□□□□ 0.56
ATN1P54259 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC18.53■□□□□ 0.56
ATN1P54259 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC18.53■□□□□ 0.56
ATN1P54259 AC135586.1-201ENST00000539323 574 ntBASIC18.53■□□□□ 0.56
ATN1P54259 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC18.53■□□□□ 0.56
ATN1P54259 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC18.53■□□□□ 0.56
ATN1P54259 AC091167.2-201ENST00000579581 588 ntBASIC18.53■□□□□ 0.56
ATN1P54259 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
ATN1P54259 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC18.53■□□□□ 0.56
ATN1P54259 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
ATN1P54259 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC18.53■□□□□ 0.56
ATN1P54259 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
ATN1P54259 AL162274.1-201ENST00000617191 1098 ntBASIC18.53■□□□□ 0.56
ATN1P54259 CETN4P-206ENST00000642099 2168 ntBASIC18.53■□□□□ 0.56
ATN1P54259 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC18.53■□□□□ 0.56
ATN1P54259 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ATN1P54259 TOP3BP1-201ENST00000420768 1380 ntBASIC18.53■□□□□ 0.56
ATN1P54259 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ATN1P54259 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ATN1P54259 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
ATN1P54259 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
ATN1P54259 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ATN1P54259 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
ATN1P54259 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ATN1P54259 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ATN1P54259 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ATN1P54259 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC18.52■□□□□ 0.56
ATN1P54259 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ATN1P54259 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ATN1P54259 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ATN1P54259 AP000974.1-201ENST00000623909 2387 ntBASIC18.52■□□□□ 0.56
ATN1P54259 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ATN1P54259 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ATN1P54259 AC010978.1-202ENST00000427050 893 ntTSL 3 BASIC18.52■□□□□ 0.56
ATN1P54259 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC18.52■□□□□ 0.56
ATN1P54259 MRPS36-204ENST00000512880 1200 ntTSL 5 BASIC18.52■□□□□ 0.56
ATN1P54259 KRT17P8-201ENST00000540749 863 ntBASIC18.52■□□□□ 0.56
ATN1P54259 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC18.52■□□□□ 0.56
ATN1P54259 AC104794.3-201ENST00000566840 1248 ntBASIC18.52■□□□□ 0.56
ATN1P54259 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC18.52■□□□□ 0.56
ATN1P54259 MRPS36-205ENST00000602380 1200 ntTSL 2 BASIC18.52■□□□□ 0.56
ATN1P54259 AC008494.3-201ENST00000606615 944 ntBASIC18.52■□□□□ 0.56
ATN1P54259 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC18.52■□□□□ 0.56
ATN1P54259 MAP3K14-205ENST00000617331 1049 ntTSL 5 BASIC18.52■□□□□ 0.56
ATN1P54259 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
ATN1P54259 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ATN1P54259 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
ATN1P54259 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ATN1P54259 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
ATN1P54259 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
ATN1P54259 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
ATN1P54259 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
ATN1P54259 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
ATN1P54259 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
ATN1P54259 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC18.52■□□□□ 0.55
ATN1P54259 AC131009.4-201ENST00000624048 1740 ntBASIC18.52■□□□□ 0.55
ATN1P54259 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
ATN1P54259 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ATN1P54259 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
ATN1P54259 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC18.51■□□□□ 0.55
ATN1P54259 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC18.51■□□□□ 0.55
ATN1P54259 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC18.51■□□□□ 0.55
ATN1P54259 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms