Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
COPAP53621 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
COPAP53621 MRPL20P1-201ENST00000400819 433 ntBASIC17.49■□□□□ 0.39
COPAP53621 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
COPAP53621 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC17.49■□□□□ 0.39
COPAP53621 ALG1L5P-201ENST00000482043 771 ntBASIC17.49■□□□□ 0.39
COPAP53621 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC17.49■□□□□ 0.39
COPAP53621 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.49■□□□□ 0.39
COPAP53621 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
COPAP53621 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
COPAP53621 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.49■□□□□ 0.39
COPAP53621 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
COPAP53621 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
COPAP53621 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.49■□□□□ 0.39
COPAP53621 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
COPAP53621 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
COPAP53621 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
COPAP53621 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
COPAP53621 REXO1L11P-201ENST00000620964 1927 ntBASIC17.49■□□□□ 0.39
COPAP53621 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
COPAP53621 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
COPAP53621 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.48■□□□□ 0.39
COPAP53621 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
COPAP53621 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
COPAP53621 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
COPAP53621 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.48■□□□□ 0.39
COPAP53621 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
COPAP53621 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.48■□□□□ 0.39
COPAP53621 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC17.48■□□□□ 0.39
COPAP53621 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
COPAP53621 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.48■□□□□ 0.39
COPAP53621 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
COPAP53621 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.48■□□□□ 0.39
COPAP53621 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC17.48■□□□□ 0.39
COPAP53621 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
COPAP53621 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
COPAP53621 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
COPAP53621 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
COPAP53621 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
COPAP53621 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
COPAP53621 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.48■□□□□ 0.39
COPAP53621 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
COPAP53621 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
COPAP53621 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
COPAP53621 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
COPAP53621 GGCT-205ENST00000409436 954 ntTSL 3 BASIC17.48■□□□□ 0.39
COPAP53621 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC17.48■□□□□ 0.39
COPAP53621 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
COPAP53621 DNAJB3-202ENST00000449667 1266 ntBASIC17.48■□□□□ 0.39
COPAP53621 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC17.48■□□□□ 0.39
COPAP53621 YBX1P5-201ENST00000509441 847 ntBASIC17.48■□□□□ 0.39
COPAP53621 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
COPAP53621 POLD4-207ENST00000531239 584 ntTSL 2 BASIC17.48■□□□□ 0.39
COPAP53621 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC17.48■□□□□ 0.39
COPAP53621 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC17.48■□□□□ 0.39
COPAP53621 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC17.48■□□□□ 0.39
COPAP53621 AC079781.4-201ENST00000641908 219 ntBASIC17.48■□□□□ 0.39
COPAP53621 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.48■□□□□ 0.39
COPAP53621 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.48■□□□□ 0.39
COPAP53621 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.48■□□□□ 0.39
COPAP53621 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
COPAP53621 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
COPAP53621 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
COPAP53621 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC17.48■□□□□ 0.39
COPAP53621 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
COPAP53621 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
COPAP53621 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
COPAP53621 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
COPAP53621 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
COPAP53621 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
COPAP53621 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
COPAP53621 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
COPAP53621 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
COPAP53621 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC17.47■□□□□ 0.39
COPAP53621 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
COPAP53621 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
COPAP53621 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
COPAP53621 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
COPAP53621 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
COPAP53621 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC17.47■□□□□ 0.39
COPAP53621 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC17.47■□□□□ 0.39
COPAP53621 AC211486.1-202ENST00000416371 468 ntBASIC17.47■□□□□ 0.39
COPAP53621 ACTG1P4-201ENST00000425123 1122 ntBASIC17.47■□□□□ 0.39
COPAP53621 AP006288.1-201ENST00000446065 395 ntBASIC17.47■□□□□ 0.39
COPAP53621 AC211476.1-201ENST00000503899 468 ntBASIC17.47■□□□□ 0.39
COPAP53621 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC17.47■□□□□ 0.39
COPAP53621 AC005829.1-201ENST00000570002 483 ntBASIC17.47■□□□□ 0.39
COPAP53621 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC17.47■□□□□ 0.39
COPAP53621 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
COPAP53621 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC17.47■□□□□ 0.39
COPAP53621 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC17.47■□□□□ 0.39
COPAP53621 GGTLC5P-201ENST00000617623 998 ntBASIC17.47■□□□□ 0.39
COPAP53621 AC010507.1-201ENST00000633895 436 ntBASIC17.47■□□□□ 0.39
COPAP53621 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
COPAP53621 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
COPAP53621 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
COPAP53621 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.47■□□□□ 0.39
COPAP53621 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.47■□□□□ 0.39
COPAP53621 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
COPAP53621 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms