Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 GAPDHP21-201ENST00000450301 1010 ntBASIC20.78■□□□□ 0.92
NUP98P52948 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NUP98P52948 ZNF890P-202ENST00000530367 1156 ntBASIC20.78■□□□□ 0.92
NUP98P52948 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC20.78■□□□□ 0.92
NUP98P52948 RNA5-8SN1-201ENST00000610460 153 ntBASIC20.78■□□□□ 0.92
NUP98P52948 RNA5-8SN5-202ENST00000612463 153 ntBASIC20.78■□□□□ 0.92
NUP98P52948 RNA5-8SN4-201ENST00000613359 153 ntBASIC20.78■□□□□ 0.92
NUP98P52948 RNA5-8SN5-201ENST00000619471 153 ntBASIC20.78■□□□□ 0.92
NUP98P52948 IGHV3-72-202ENST00000621503 303 ntBASIC20.78■□□□□ 0.92
NUP98P52948 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
NUP98P52948 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NUP98P52948 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
NUP98P52948 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NUP98P52948 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
NUP98P52948 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NUP98P52948 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NUP98P52948 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
NUP98P52948 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
NUP98P52948 AC060834.1-201ENST00000443027 2032 ntBASIC20.77■□□□□ 0.92
NUP98P52948 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NUP98P52948 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NUP98P52948 PIN1P1-201ENST00000412108 996 ntBASIC20.77■□□□□ 0.92
NUP98P52948 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC20.77■□□□□ 0.92
NUP98P52948 RPL37AP1-201ENST00000412502 279 ntBASIC20.77■□□□□ 0.92
NUP98P52948 AL079307.3-201ENST00000556114 283 ntBASIC20.77■□□□□ 0.92
NUP98P52948 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
NUP98P52948 AL139011.1-202ENST00000642063 584 ntBASIC20.77■□□□□ 0.92
NUP98P52948 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
NUP98P52948 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
NUP98P52948 AC007613.1-201ENST00000572811 2597 ntBASIC20.77■□□□□ 0.92
NUP98P52948 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
NUP98P52948 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NUP98P52948 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
NUP98P52948 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC20.77■□□□□ 0.91
NUP98P52948 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC20.77■□□□□ 0.91
NUP98P52948 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.91
NUP98P52948 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NUP98P52948 AC141586.5-201ENST00000624546 2050 ntBASIC20.76■□□□□ 0.91
NUP98P52948 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
NUP98P52948 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NUP98P52948 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC20.76■□□□□ 0.91
NUP98P52948 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC20.76■□□□□ 0.91
NUP98P52948 NAA50-208ENST00000497255 789 ntTSL 5 BASIC20.76■□□□□ 0.91
NUP98P52948 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NUP98P52948 STOM-203ENST00000538954 1257 ntTSL 5 BASIC20.76■□□□□ 0.91
NUP98P52948 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC20.76■□□□□ 0.91
NUP98P52948 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC20.76■□□□□ 0.91
NUP98P52948 RAB34-223ENST00000636154 730 ntTSL 2 BASIC20.76■□□□□ 0.91
NUP98P52948 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
NUP98P52948 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NUP98P52948 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NUP98P52948 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
NUP98P52948 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NUP98P52948 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NUP98P52948 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NUP98P52948 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NUP98P52948 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
NUP98P52948 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
NUP98P52948 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NUP98P52948 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC20.76■□□□□ 0.91
NUP98P52948 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NUP98P52948 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.76■□□□□ 0.91
NUP98P52948 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NUP98P52948 CENPM-206ENST00000407253 818 ntTSL 2 BASIC20.76■□□□□ 0.91
NUP98P52948 AL512638.1-201ENST00000457493 794 ntBASIC20.76■□□□□ 0.91
NUP98P52948 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC20.76■□□□□ 0.91
NUP98P52948 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NUP98P52948 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NUP98P52948 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
NUP98P52948 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC20.75■□□□□ 0.91
NUP98P52948 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC20.75■□□□□ 0.91
NUP98P52948 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
NUP98P52948 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
NUP98P52948 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NUP98P52948 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC20.75■□□□□ 0.91
NUP98P52948 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
NUP98P52948 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NUP98P52948 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
NUP98P52948 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
NUP98P52948 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC20.75■□□□□ 0.91
NUP98P52948 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
NUP98P52948 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
NUP98P52948 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC20.75■□□□□ 0.91
NUP98P52948 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC20.75■□□□□ 0.91
NUP98P52948 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
NUP98P52948 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
NUP98P52948 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NUP98P52948 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
NUP98P52948 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
NUP98P52948 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
NUP98P52948 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC20.75■□□□□ 0.91
NUP98P52948 HLA-V-204ENST00000476601 1289 ntBASIC20.75■□□□□ 0.91
NUP98P52948 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
NUP98P52948 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC20.75■□□□□ 0.91
NUP98P52948 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC20.75■□□□□ 0.91
NUP98P52948 BANP-227ENST00000626016 2144 ntTSL 2 BASIC20.75■□□□□ 0.91
NUP98P52948 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC20.75■□□□□ 0.91
NUP98P52948 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
NUP98P52948 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NUP98P52948 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms