Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
GPC3P51654 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
GPC3P51654 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
GPC3P51654 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC18.63■□□□□ 0.57
GPC3P51654 AL121761.2-201ENST00000598007 1648 ntBASIC18.63■□□□□ 0.57
GPC3P51654 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
GPC3P51654 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
GPC3P51654 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
GPC3P51654 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC18.63■□□□□ 0.57
GPC3P51654 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
GPC3P51654 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC18.63■□□□□ 0.57
GPC3P51654 AC004461.1-201ENST00000412461 403 ntBASIC18.63■□□□□ 0.57
GPC3P51654 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC18.63■□□□□ 0.57
GPC3P51654 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC18.63■□□□□ 0.57
GPC3P51654 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
GPC3P51654 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
GPC3P51654 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC18.63■□□□□ 0.57
GPC3P51654 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC18.63■□□□□ 0.57
GPC3P51654 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC18.63■□□□□ 0.57
GPC3P51654 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC18.63■□□□□ 0.57
GPC3P51654 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
GPC3P51654 AC027796.2-201ENST00000575326 344 ntBASIC18.63■□□□□ 0.57
GPC3P51654 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
GPC3P51654 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC18.63■□□□□ 0.57
GPC3P51654 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC18.63■□□□□ 0.57
GPC3P51654 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
GPC3P51654 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
GPC3P51654 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC18.63■□□□□ 0.57
GPC3P51654 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
GPC3P51654 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GPC3P51654 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GPC3P51654 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GPC3P51654 AL353732.1-201ENST00000569618 1459 ntBASIC18.63■□□□□ 0.57
GPC3P51654 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GPC3P51654 FRMD8P1-201ENST00000440433 1524 ntBASIC18.63■□□□□ 0.57
GPC3P51654 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
GPC3P51654 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
GPC3P51654 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GPC3P51654 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GPC3P51654 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC18.63■□□□□ 0.57
GPC3P51654 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
GPC3P51654 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC18.63■□□□□ 0.57
GPC3P51654 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
GPC3P51654 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
GPC3P51654 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
GPC3P51654 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
GPC3P51654 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
GPC3P51654 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
GPC3P51654 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
GPC3P51654 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
GPC3P51654 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
GPC3P51654 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
GPC3P51654 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
GPC3P51654 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
GPC3P51654 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
GPC3P51654 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
GPC3P51654 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC18.62■□□□□ 0.57
GPC3P51654 AL355306.1-201ENST00000415580 579 ntBASIC18.62■□□□□ 0.57
GPC3P51654 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC18.62■□□□□ 0.57
GPC3P51654 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
GPC3P51654 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
GPC3P51654 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC18.62■□□□□ 0.57
GPC3P51654 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC18.62■□□□□ 0.57
GPC3P51654 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC18.62■□□□□ 0.57
GPC3P51654 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC18.62■□□□□ 0.57
GPC3P51654 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC18.62■□□□□ 0.57
GPC3P51654 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC18.62■□□□□ 0.57
GPC3P51654 AC022145.2-201ENST00000598203 171 ntBASIC18.62■□□□□ 0.57
GPC3P51654 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC18.62■□□□□ 0.57
GPC3P51654 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
GPC3P51654 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
GPC3P51654 TOP3BP1-201ENST00000420768 1380 ntBASIC18.62■□□□□ 0.57
GPC3P51654 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
GPC3P51654 AC012569.1-201ENST00000591191 1524 ntBASIC18.62■□□□□ 0.57
GPC3P51654 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC18.62■□□□□ 0.57
GPC3P51654 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
GPC3P51654 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC18.62■□□□□ 0.57
GPC3P51654 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
GPC3P51654 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
GPC3P51654 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
GPC3P51654 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
GPC3P51654 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
GPC3P51654 AC106820.2-201ENST00000563775 3264 ntBASIC18.62■□□□□ 0.57
GPC3P51654 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
GPC3P51654 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
GPC3P51654 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
GPC3P51654 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
GPC3P51654 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
GPC3P51654 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
GPC3P51654 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
GPC3P51654 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC18.61■□□□□ 0.57
GPC3P51654 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
GPC3P51654 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
GPC3P51654 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
GPC3P51654 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
GPC3P51654 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
GPC3P51654 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC18.61■□□□□ 0.57
GPC3P51654 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
GPC3P51654 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
GPC3P51654 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms