Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC18.66■□□□□ 0.58
BRCA2P51587 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
BRCA2P51587 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
BRCA2P51587 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
BRCA2P51587 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
BRCA2P51587 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
BRCA2P51587 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.66■□□□□ 0.58
BRCA2P51587 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
BRCA2P51587 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
BRCA2P51587 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC18.65■□□□□ 0.58
BRCA2P51587 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC18.65■□□□□ 0.58
BRCA2P51587 MTND6P24-201ENST00000440466 518 ntBASIC18.65■□□□□ 0.58
BRCA2P51587 AL512361.1-201ENST00000554200 418 ntBASIC18.65■□□□□ 0.58
BRCA2P51587 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC18.65■□□□□ 0.58
BRCA2P51587 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC18.65■□□□□ 0.58
BRCA2P51587 5S_rRNA.22-201ENST00000614916 106 ntBASIC18.65■□□□□ 0.58
BRCA2P51587 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
BRCA2P51587 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
BRCA2P51587 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.65■□□□□ 0.58
BRCA2P51587 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
BRCA2P51587 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
BRCA2P51587 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.65■□□□□ 0.58
BRCA2P51587 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
BRCA2P51587 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.65■□□□□ 0.58
BRCA2P51587 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC18.65■□□□□ 0.58
BRCA2P51587 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC18.65■□□□□ 0.58
BRCA2P51587 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
BRCA2P51587 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
BRCA2P51587 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC18.65■□□□□ 0.58
BRCA2P51587 AL035456.1-201ENST00000456064 1369 ntBASIC18.65■□□□□ 0.58
BRCA2P51587 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC18.65■□□□□ 0.58
BRCA2P51587 MIR663B-201ENST00000408361 115 ntBASIC18.65■□□□□ 0.58
BRCA2P51587 RPL28-204ENST00000431533 590 ntTSL 2 BASIC18.65■□□□□ 0.58
BRCA2P51587 GOLGA2P4-201ENST00000441462 777 ntBASIC18.65■□□□□ 0.58
BRCA2P51587 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC18.65■□□□□ 0.58
BRCA2P51587 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
BRCA2P51587 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
BRCA2P51587 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
BRCA2P51587 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
BRCA2P51587 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.64■□□□□ 0.58
BRCA2P51587 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
BRCA2P51587 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
BRCA2P51587 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
BRCA2P51587 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
BRCA2P51587 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
BRCA2P51587 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
BRCA2P51587 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
BRCA2P51587 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC18.64■□□□□ 0.57
BRCA2P51587 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
BRCA2P51587 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
BRCA2P51587 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
BRCA2P51587 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
BRCA2P51587 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
BRCA2P51587 CSF2RBP1-201ENST00000447905 391 ntBASIC18.64■□□□□ 0.57
BRCA2P51587 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC18.64■□□□□ 0.57
BRCA2P51587 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC18.64■□□□□ 0.57
BRCA2P51587 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC18.64■□□□□ 0.57
BRCA2P51587 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
BRCA2P51587 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
BRCA2P51587 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
BRCA2P51587 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
BRCA2P51587 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
BRCA2P51587 GCK-202ENST00000345378 2421 ntTSL 2 BASIC18.64■□□□□ 0.57
BRCA2P51587 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC18.64■□□□□ 0.57
BRCA2P51587 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.64■□□□□ 0.57
BRCA2P51587 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.64■□□□□ 0.57
BRCA2P51587 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
BRCA2P51587 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
BRCA2P51587 RNA5SP412-201ENST00000516234 123 ntBASIC18.64■□□□□ 0.57
BRCA2P51587 AC044860.1-202ENST00000559481 777 ntBASIC18.64■□□□□ 0.57
BRCA2P51587 AC243960.2-201ENST00000600996 747 ntBASIC18.64■□□□□ 0.57
BRCA2P51587 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC18.64■□□□□ 0.57
BRCA2P51587 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
BRCA2P51587 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
BRCA2P51587 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
BRCA2P51587 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
BRCA2P51587 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
BRCA2P51587 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
BRCA2P51587 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
BRCA2P51587 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC18.63■□□□□ 0.57
BRCA2P51587 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
BRCA2P51587 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC18.63■□□□□ 0.57
BRCA2P51587 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
BRCA2P51587 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
BRCA2P51587 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
BRCA2P51587 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
BRCA2P51587 EMC4-209ENST00000559421 497 ntTSL 2 BASIC18.63■□□□□ 0.57
BRCA2P51587 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC18.63■□□□□ 0.57
BRCA2P51587 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC18.63■□□□□ 0.57
BRCA2P51587 CETN4P-206ENST00000642099 2168 ntBASIC18.63■□□□□ 0.57
BRCA2P51587 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
BRCA2P51587 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
BRCA2P51587 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC18.62■□□□□ 0.57
BRCA2P51587 AC103810.3-201ENST00000583567 96 ntBASIC18.62■□□□□ 0.57
BRCA2P51587 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
BRCA2P51587 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
BRCA2P51587 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
BRCA2P51587 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.62■□□□□ 0.57
BRCA2P51587 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC18.62■□□□□ 0.57
BRCA2P51587 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms