Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
MMP13P45452 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
MMP13P45452 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
MMP13P45452 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
MMP13P45452 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
MMP13P45452 AC097637.2-201ENST00000624096 1997 ntBASIC17.64■□□□□ 0.41
MMP13P45452 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
MMP13P45452 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
MMP13P45452 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
MMP13P45452 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MMP13P45452 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MMP13P45452 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
MMP13P45452 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
MMP13P45452 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
MMP13P45452 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MMP13P45452 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MMP13P45452 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.63■□□□□ 0.41
MMP13P45452 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
MMP13P45452 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
MMP13P45452 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC17.63■□□□□ 0.41
MMP13P45452 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MMP13P45452 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC17.63■□□□□ 0.41
MMP13P45452 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC17.63■□□□□ 0.41
MMP13P45452 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
MMP13P45452 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC17.63■□□□□ 0.41
MMP13P45452 AL121912.1-201ENST00000603683 238 ntBASIC17.63■□□□□ 0.41
MMP13P45452 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC17.63■□□□□ 0.41
MMP13P45452 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
MMP13P45452 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MMP13P45452 AL513477.1-201ENST00000602865 2407 ntBASIC17.63■□□□□ 0.41
MMP13P45452 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MMP13P45452 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MMP13P45452 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.63■□□□□ 0.41
MMP13P45452 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MMP13P45452 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MMP13P45452 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
MMP13P45452 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
MMP13P45452 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MMP13P45452 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.63■□□□□ 0.41
MMP13P45452 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
MMP13P45452 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC17.63■□□□□ 0.41
MMP13P45452 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MMP13P45452 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
MMP13P45452 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MMP13P45452 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC17.62■□□□□ 0.41
MMP13P45452 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC17.62■□□□□ 0.41
MMP13P45452 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MMP13P45452 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MMP13P45452 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
MMP13P45452 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.62■□□□□ 0.41
MMP13P45452 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
MMP13P45452 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
MMP13P45452 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
MMP13P45452 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
MMP13P45452 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC17.62■□□□□ 0.41
MMP13P45452 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
MMP13P45452 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MMP13P45452 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC17.62■□□□□ 0.41
MMP13P45452 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
MMP13P45452 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC17.62■□□□□ 0.41
MMP13P45452 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MMP13P45452 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
MMP13P45452 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17.62■□□□□ 0.41
MMP13P45452 FAAHP1-202ENST00000446499 1238 ntBASIC17.62■□□□□ 0.41
MMP13P45452 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
MMP13P45452 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC17.62■□□□□ 0.41
MMP13P45452 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.62■□□□□ 0.41
MMP13P45452 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC17.62■□□□□ 0.41
MMP13P45452 MTDHP4-201ENST00000600287 670 ntBASIC17.62■□□□□ 0.41
MMP13P45452 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MMP13P45452 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
MMP13P45452 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MMP13P45452 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MMP13P45452 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC17.62■□□□□ 0.41
MMP13P45452 GID4-202ENST00000376345 1391 ntTSL 3 BASIC17.62■□□□□ 0.41
MMP13P45452 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC17.62■□□□□ 0.41
MMP13P45452 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
MMP13P45452 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
MMP13P45452 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
MMP13P45452 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
MMP13P45452 MST1L-201ENST00000442552 2185 ntBASIC17.62■□□□□ 0.41
MMP13P45452 AL662844.4-201ENST00000606367 2838 ntBASIC17.62■□□□□ 0.41
MMP13P45452 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC17.62■□□□□ 0.41
MMP13P45452 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MMP13P45452 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC17.62■□□□□ 0.41
MMP13P45452 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
MMP13P45452 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC17.61■□□□□ 0.41
MMP13P45452 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
MMP13P45452 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MMP13P45452 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC17.61■□□□□ 0.41
MMP13P45452 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MMP13P45452 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MMP13P45452 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC17.61■□□□□ 0.41
MMP13P45452 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
MMP13P45452 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
MMP13P45452 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
MMP13P45452 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
MMP13P45452 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MMP13P45452 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MMP13P45452 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms