Protein–RNA interactions for Protein: P35236

PTPN7, Tyrosine-protein phosphatase non-receptor type 7, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7P35236 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
PTPN7P35236 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC17.49■□□□□ 0.39
PTPN7P35236 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC17.49■□□□□ 0.39
PTPN7P35236 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PTPN7P35236 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
PTPN7P35236 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PTPN7P35236 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PTPN7P35236 AL513523.2-202ENST00000427283 2040 ntBASIC17.48■□□□□ 0.39
PTPN7P35236 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PTPN7P35236 GGT3P-204ENST00000453783 1664 ntBASIC17.48■□□□□ 0.39
PTPN7P35236 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC17.48■□□□□ 0.39
PTPN7P35236 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC17.48■□□□□ 0.39
PTPN7P35236 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PTPN7P35236 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC17.48■□□□□ 0.39
PTPN7P35236 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PTPN7P35236 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PTPN7P35236 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PTPN7P35236 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC17.48■□□□□ 0.39
PTPN7P35236 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
PTPN7P35236 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PTPN7P35236 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC17.48■□□□□ 0.39
PTPN7P35236 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PTPN7P35236 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PTPN7P35236 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PTPN7P35236 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PTPN7P35236 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17.48■□□□□ 0.39
PTPN7P35236 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC17.48■□□□□ 0.39
PTPN7P35236 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17.48■□□□□ 0.39
PTPN7P35236 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.48■□□□□ 0.39
PTPN7P35236 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC17.48■□□□□ 0.39
PTPN7P35236 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC17.48■□□□□ 0.39
PTPN7P35236 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PTPN7P35236 AC091167.2-201ENST00000579581 588 ntBASIC17.48■□□□□ 0.39
PTPN7P35236 MTDHP4-201ENST00000600287 670 ntBASIC17.48■□□□□ 0.39
PTPN7P35236 AC008608.2-201ENST00000606089 416 ntBASIC17.48■□□□□ 0.39
PTPN7P35236 AL805961.1-202ENST00000641562 540 ntBASIC17.48■□□□□ 0.39
PTPN7P35236 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
PTPN7P35236 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PTPN7P35236 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PTPN7P35236 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PTPN7P35236 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PTPN7P35236 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
PTPN7P35236 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
PTPN7P35236 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PTPN7P35236 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PTPN7P35236 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PTPN7P35236 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
PTPN7P35236 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PTPN7P35236 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PTPN7P35236 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC17.48■□□□□ 0.39
PTPN7P35236 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.48■□□□□ 0.39
PTPN7P35236 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
PTPN7P35236 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PTPN7P35236 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PTPN7P35236 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PTPN7P35236 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
PTPN7P35236 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PTPN7P35236 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
PTPN7P35236 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PTPN7P35236 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC17.47■□□□□ 0.39
PTPN7P35236 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PTPN7P35236 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PTPN7P35236 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC17.47■□□□□ 0.39
PTPN7P35236 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PTPN7P35236 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
PTPN7P35236 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PTPN7P35236 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PTPN7P35236 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
PTPN7P35236 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC17.47■□□□□ 0.39
PTPN7P35236 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PTPN7P35236 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
PTPN7P35236 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC17.47■□□□□ 0.39
PTPN7P35236 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PTPN7P35236 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
PTPN7P35236 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.47■□□□□ 0.39
PTPN7P35236 CROCCP1-201ENST00000426910 5675 ntBASIC17.47■□□□□ 0.39
PTPN7P35236 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PTPN7P35236 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
PTPN7P35236 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC17.47■□□□□ 0.39
PTPN7P35236 HCG4P8-203ENST00000443049 980 ntBASIC17.47■□□□□ 0.39
PTPN7P35236 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC17.47■□□□□ 0.39
PTPN7P35236 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC17.47■□□□□ 0.39
PTPN7P35236 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PTPN7P35236 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
PTPN7P35236 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC17.47■□□□□ 0.39
PTPN7P35236 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PTPN7P35236 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC17.47■□□□□ 0.39
PTPN7P35236 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC17.47■□□□□ 0.39
PTPN7P35236 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PTPN7P35236 GCK-209ENST00000616242 2260 ntTSL 5 BASIC17.47■□□□□ 0.39
PTPN7P35236 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
PTPN7P35236 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC17.47■□□□□ 0.39
PTPN7P35236 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PTPN7P35236 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PTPN7P35236 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC17.47■□□□□ 0.39
PTPN7P35236 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC17.47■□□□□ 0.39
PTPN7P35236 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PTPN7P35236 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PTPN7P35236 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
PTPN7P35236 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms